RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FAM231BA6NCW3 169 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 CD300LBA8K4G0 201 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 KIAA1324LA8MWY0 1029 aaPredicted RBP7.65□□□□□ -1.18
COMMD3-215ENST00000602574 H0YJW9 148 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 DHHO43323 396 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 ZNF728P0DKX0 622 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 REG1BP48304 166 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 PGFP49763 221 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 TCTAP57738 103 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 PITX1P78337 314 aaPredicted RBP7.65□□□□□ -1.18
COMMD3-215ENST00000602574 RUNX3Q13761 415 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 GGTLC2Q14390 218 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 IL13RA2Q14627 380 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 TNXAQ16473 311 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 ACSF3Q4G176 576 aaPredicted RBP7.65□□□□□ -1.18
COMMD3-215ENST00000602574 TMEM97Q5BJF2 176 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 MUC21Q5SSG8 566 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 ACSM6Q6P461 480 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 AGTRAPQ6RW13 159 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 KCNG3Q8TAE7 436 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 DNAJC30Q96LL9 226 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 STRADBQ9C0K7 418 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 GP6Q9HCN6 339 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 SERTAD4Q9NUC0 356 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 ARL15Q9NXU5 204 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 PLA2G3Q9NZ20 509 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 SIGLEC9Q9Y336 463 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 DUXBA0A1W2PPF3 345 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 C7orf71A4D174 169 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 GAGE12JA6NER3 117 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 MEIS3P2A8K0S8 358 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 FABP5P3A8MUU1 101 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 GAGE7O76087 117 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 CPSF4O95639 269 aaKnown RBP7.64□□□□□ -1.19
COMMD3-215ENST00000602574 ABHD16AO95870 558 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 GAGE12FP0CL80 117 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 GAGE12GP0CL81 117 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 GAGE12IP0CL82 117 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 TACR1P25103 407 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 LTBRP36941 435 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 CCR2P41597 374 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 TCL1AP56279 114 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 KRTDAPP60985 99 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 GAGE4Q13068 117 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 ZNF766Q5HY98 468 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 FFAR4Q5NUL3 377 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 FAM162BQ5T6X4 162 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 TP53INP2Q8IXH6 220 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 UMODL1-AS1Q8N2C9 162 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 LIN37Q96GY3 246 aaPredicted RBP7.64□□□□□ -1.19
COMMD3-215ENST00000602574 VSTM2LQ96N03 204 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 SPIN2AQ99865 258 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 SPIN2BQ9BPZ2 258 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 HCAR1Q9BXC0 346 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 PARP12Q9H0J9 701 aaKnown RBP7.64□□□□□ -1.19
COMMD3-215ENST00000602574 NKX2-4Q9H2Z4 354 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 C21orf140B9A014 251 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 SAP18O00422 153 aaKnown RBP7.64□□□□□ -1.19
COMMD3-215ENST00000602574 NRG2O14511 850 aaPredicted RBP7.64□□□□□ -1.19
COMMD3-215ENST00000602574 ZNF217O75362 1048 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 UPK3AO75631 287 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 SERF1AO75920 110 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 STK17BO94768 372 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 AGFG2O95081 481 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 CATP04040 527 aaKnown RBP7.64□□□□□ -1.19
COMMD3-215ENST00000602574 COX7A2P14406 83 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 ZNF17P17021 662 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 IL2P60568 153 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 CCL20P78556 96 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 GUCA2AQ02747 115 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 SPEM2Q0P670 501 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 EFNB3Q15768 340 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 IGFBP7Q16270 282 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 KIAA1644Q3SXP7 199 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 LCN15Q6UWW0 184 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 SYT12Q8IV01 421 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 GJD3Q8N144 294 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 SLC25A33Q9BSK2 321 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 LMF2Q9BU23 707 aaKnown RBP7.64□□□□□ -1.19
COMMD3-215ENST00000602574 PNRC2Q9NPJ4 139 aaKnown RBP7.64□□□□□ -1.19
COMMD3-215ENST00000602574 SIGLEC8Q9NYZ4 499 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 MARCH4Q9P2E8 410 aaPredicted RBP7.64□□□□□ -1.19
COMMD3-215ENST00000602574 NSG2Q9Y328 171 aa7.64□□□□□ -1.19
COMMD3-215ENST00000602574 GRXCR1A8MXD5 290 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 PIN1P1O15428 100 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 KRASP01116 189 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 OR1D4P47884 311 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 FOXG1P55316 489 aaPredicted RBP7.63□□□□□ -1.19
COMMD3-215ENST00000602574 TAS2R46P59540 309 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 RPL8P62917 257 aaKnown RBP7.63□□□□□ -1.19
COMMD3-215ENST00000602574 ROM1Q03395 351 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 ZNF85Q03923 595 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 OR8B8Q15620 311 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 NRN1LQ496H8 165 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 VAX1Q5SQQ9 334 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 ERASQ7Z444 233 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 CLECL1Q8IZS7 167 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 ZNF611Q8N823 705 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 OR5H2Q8NGV7 314 aa7.63□□□□□ -1.19
COMMD3-215ENST00000602574 OR8S1Q8NH09 359 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms