RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 RTL8AQ9BWD3 113 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 ZNF442Q9H7R0 627 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 OR5AC2Q9NZP5 309 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 POMT1Q9Y6A1 747 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 CADP27708 2225 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 KMT2BQ9UMN6 2715 aaPredicted RBP9.91□□□□□ -0.82
VRK3-223ENST00000601341 IGKV1D-8A0A087WSZ0 117 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 PIGBOS1A0A0B4J2F0 54 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.91□□□□□ -0.82
VRK3-223ENST00000601341 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.91□□□□□ -0.82
VRK3-223ENST00000601341 TMEM218A2RU14 115 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 ATG12O94817 140 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 KNG1P01042 644 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 APOC3P02656 99 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 CD3EP07766 207 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 ZNF728P0DKX0 622 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 SRPXP78539 464 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 OR8G1Q15617 311 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 IAH1Q2TAA2 248 aaPredicted RBP9.91□□□□□ -0.82
VRK3-223ENST00000601341 SPAG16Q8N0X2 631 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 SVBPQ8N300 66 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 OR1S2Q8NGQ3 325 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 GTF3AQ92664 365 aaKnown RBP9.91□□□□□ -0.82
VRK3-223ENST00000601341 MOB3AQ96BX8 217 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 FAAP24Q9BTP7 215 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 ADAT1Q9BUB4 502 aaKnown RBP9.91□□□□□ -0.82
VRK3-223ENST00000601341 NAA60Q9H7X0 242 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 CARHSP1Q9Y2V2 147 aaKnown RBP9.91□□□□□ -0.82
VRK3-223ENST00000601341 ATP23Q9Y6H3 246 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 HEATR1Q9H583 2144 aaKnown RBP9.9□□□□□ -0.82
VRK3-223ENST00000601341 ANKHD1Q8IWZ3 2542 aaKnown RBP9.9□□□□□ -0.82
VRK3-223ENST00000601341 IGLV3-9A0A075B6K5 115 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 HAAOP46952 286 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 BLOC1S1P78537 153 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 MSMPQ1L6U9 139 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 GPR157Q5UAW9 335 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 ADAM5Q6NVV9 412 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 LINC00596Q86U02 117 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 ZNF573Q86YE8 665 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 FAM71E2Q8N5Q1 922 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 CCDC71LQ8N9Z2 235 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 SULT4A1Q9BR01 284 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 FGF23Q9GZV9 251 aaPredicted RBP9.9□□□□□ -0.82
VRK3-223ENST00000601341 ST3GAL6Q9Y274 331 aa9.9□□□□□ -0.82
VRK3-223ENST00000601341 ZNF462Q96JM2 2506 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 IGKV1-12A0A0C4DH73 117 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 A0A1B0GWJ7 208 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 MSGN1A6NI15 193 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 E5RGE8 158 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 H7C1Q1 480 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 K7EPK0 472 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 SPRY1O43609 319 aaPredicted RBP9.89□□□□□ -0.83
VRK3-223ENST00000601341 ANGPTL7O43827 346 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 PLATP00750 562 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 IGKV1D-12P01611 117 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 HOXB5P09067 269 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 HKR1P10072 659 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 GLP1RP43220 463 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 PIGPP57054 158 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 TMEM187Q14656 261 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 ABCA11PQ4W5N1 156 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 FAM76BQ5HYJ3 339 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 PXDC1Q5TGL8 231 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 LRP11Q86VZ4 500 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 CALHM1Q8IU99 346 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 FBXL14Q8N1E6 418 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 ZNF611Q8N823 705 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 UBAC2Q8NBM4 344 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 OR51F2Q8NH61 342 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 RTN4IP1Q8WWV3 396 aaPredicted RBP9.89□□□□□ -0.83
VRK3-223ENST00000601341 MRPL24Q96A35 216 aaKnown RBP9.89□□□□□ -0.83
VRK3-223ENST00000601341 RSRP1Q9BUV0 290 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 MRPL37Q9BZE1 423 aaKnown RBP9.89□□□□□ -0.83
VRK3-223ENST00000601341 NKX6-2Q9C056 277 aaPredicted RBP9.89□□□□□ -0.83
VRK3-223ENST00000601341 ZC4H2Q9NQZ6 224 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 NSG2Q9Y328 171 aa9.89□□□□□ -0.83
VRK3-223ENST00000601341 LRP5LA4QPB2 252 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 TMEM210A6NLX4 147 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 SHISA9B4DS77 424 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 TRIM77I1YAP6 450 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 GEMIN2O14893 280 aaKnown RBP9.88□□□□□ -0.83
VRK3-223ENST00000601341 GLAP06280 429 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 SFTPBP07988 381 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 RPL12P30050 165 aaKnown RBP9.88□□□□□ -0.83
VRK3-223ENST00000601341 SULT1A2P50226 295 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 MZT1Q08AG7 82 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 PJVKQ0ZLH3 352 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 MPV17LQ2QL34 196 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 TMEM268Q5VZI3 342 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 GGNBP1Q5YKI7 109 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 Q6ZR03 302 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 SLC25A26Q70HW3 274 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 MKXQ8IYA7 352 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 LGI3Q8N145 548 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 TMED6Q8WW62 240 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 MAFIPQ8WZ33 124 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 ABHD14BQ96IU4 210 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 HDHD3Q9BSH5 251 aaPredicted RBP9.88□□□□□ -0.83
VRK3-223ENST00000601341 SEC11CQ9BY50 192 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 ARV1Q9H2C2 271 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms