RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 TCRBV3S1A0A5B6 114 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 OVOL1O14753 267 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 GP9P14770 177 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 GNB1P62873 340 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 GNGT1P63211 74 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 KISS1Q15726 138 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 FDX2Q6P4F2 183 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 LINC00311Q8N616 119 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 OR8H1Q8NGG4 311 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 OR5B12Q96R08 314 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 TM2D3Q9BRN9 247 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 FAM118AQ9NWS6 357 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 SORL1Q92673 2214 aa13.01□□□□□ -0.33
USE1-208ENST00000600970 TRIM64CA6NLI5 447 aa13□□□□□ -0.33
USE1-208ENST00000600970 SAP30O75446 220 aa13□□□□□ -0.33
USE1-208ENST00000600970 OR5H8P0DN80 308 aa13□□□□□ -0.33
USE1-208ENST00000600970 PPIFP30405 207 aaKnown RBP13□□□□□ -0.33
USE1-208ENST00000600970 KCNJ3P48549 501 aa13□□□□□ -0.33
USE1-208ENST00000600970 FLOT2Q14254 428 aa13□□□□□ -0.33
USE1-208ENST00000600970 IL13RA2Q14627 380 aa13□□□□□ -0.33
USE1-208ENST00000600970 ZNF691Q5VV52 312 aa13□□□□□ -0.33
USE1-208ENST00000600970 KDM4DQ6B0I6 523 aa13□□□□□ -0.33
USE1-208ENST00000600970 TMEM65Q6PI78 240 aa13□□□□□ -0.33
USE1-208ENST00000600970 EME1Q96AY2 570 aa13□□□□□ -0.33
USE1-208ENST00000600970 EDA2RQ9HAV5 297 aa13□□□□□ -0.33
USE1-208ENST00000600970 VSIG4Q9Y279 399 aa13□□□□□ -0.33
USE1-208ENST00000600970 C15orf65H3BRN8 121 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 HTR1AP08908 422 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 GZMHP20718 246 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 CCR9P51686 369 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 GYS2P54840 703 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 TMED1Q13445 227 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 ZSCAN26Q16670 478 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 PIGYQ3MUY2 71 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 KCTD20Q7Z5Y7 419 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 C8orf31Q8N9H6 132 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 PXT1Q8NFP0 134 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 OR52M1Q8NGK5 317 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 ISOC1Q96CN7 298 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 CHCHD6Q9BRQ6 235 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 ZNF581Q9P0T4 197 aa12.99□□□□□ -0.33
USE1-208ENST00000600970 ZNF107Q9UII5 783 aaPredicted RBP12.99□□□□□ -0.33
USE1-208ENST00000600970 OR4C45A6NMZ5 311 aa12.98□□□□□ -0.33
USE1-208ENST00000600970 SDCBPO00560 298 aaPredicted RBP12.98□□□□□ -0.33
USE1-208ENST00000600970 SULT1B1O43704 296 aa12.98□□□□□ -0.33
USE1-208ENST00000600970 IL3RAP26951 378 aa12.98□□□□□ -0.33
USE1-208ENST00000600970 SUMF2Q8NBJ7 301 aa12.98□□□□□ -0.33
USE1-208ENST00000600970 UBALD1Q8TB05 177 aa12.98□□□□□ -0.33
USE1-208ENST00000600970 DLX4Q92988 240 aaPredicted RBP12.98□□□□□ -0.33
USE1-208ENST00000600970 ARL11Q969Q4 196 aa12.98□□□□□ -0.33
USE1-208ENST00000600970 DPCDQ9BVM2 203 aaPredicted RBP12.98□□□□□ -0.33
USE1-208ENST00000600970 GFOD1Q9NXC2 390 aa12.98□□□□□ -0.33
USE1-208ENST00000600970 WSB1Q9Y6I7 421 aa12.98□□□□□ -0.33
USE1-208ENST00000600970 IGHV3-43A0A0B4J1X8 118 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 G3V2T6 193 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 G3V318 75 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 LDLRAD4O15165 306 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 SLC31A2O15432 143 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 IGLV1-40P01703 118 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 IGHV3-43DP0DP04 118 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 SLC2A2P11168 524 aaPredicted RBP12.97□□□□□ -0.33
USE1-208ENST00000600970 POLR2IP36954 125 aaKnown RBP12.97□□□□□ -0.33
USE1-208ENST00000600970 SLURP1P55000 103 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 GABPB1Q06547 395 aaPredicted RBP12.97□□□□□ -0.33
USE1-208ENST00000600970 ALKBH1Q13686 389 aaKnown RBP12.97□□□□□ -0.33
USE1-208ENST00000600970 SRSF7Q16629 238 aaKnown RBP eCLIP12.97□□□□□ -0.33
USE1-208ENST00000600970 LPCAT4Q643R3 524 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 SERPINA12Q8IW75 414 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 OR5D14Q8NGL3 314 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 OR6Q1Q8NGQ2 317 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 OR10K1Q8NGX5 313 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 RFKQ969G6 155 aa12.97□□□□□ -0.33
USE1-208ENST00000600970 DAPL1A0PJW8 107 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 MAGEA13PA6NCF6 341 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 GABRPO00591 440 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 SLC16A6O15403 523 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 TXNL1O43396 289 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 MYF6P23409 242 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 VHLP40337 213 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 RAB9AP51151 201 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 ACSM6Q6P461 480 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 PARP16Q8N5Y8 322 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 OR8J1Q8NGP2 316 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 PELI1Q96FA3 418 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 CIB1Q99828 191 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 GABARAPL1Q9H0R8 117 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 ALX4Q9H161 411 aaPredicted RBP12.96□□□□□ -0.33
USE1-208ENST00000600970 OR51J1Q9H342 316 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 CHCHD3Q9NX63 227 aaKnown RBP12.96□□□□□ -0.33
USE1-208ENST00000600970 NKX1-2Q9UD57 310 aaPredicted RBP12.96□□□□□ -0.33
USE1-208ENST00000600970 ENOPH1Q9UHY7 261 aa12.96□□□□□ -0.33
USE1-208ENST00000600970 TMEM30CPA0ZSE6 113 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 FAM90A10PA6NDY2 464 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 J3QLW9 94 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 J3QRE1 110 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 ATP6V0E1O15342 81 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 HTR3BO95264 441 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 ZNF19P17023 458 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 VEGFCP49767 419 aa12.95□□□□□ -0.34
USE1-208ENST00000600970 ZNF137PP52743 207 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms