RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 LSAMPQ13449 338 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 CR1LQ2VPA4 569 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 MOB1BQ7L9L4 216 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 LINC01356Q8N9X3 169 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 SMIM4Q8WVI0 70 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 MSI2Q96DH6 328 aaKnown RBP16.85■□□□□ 0.29
PNKP-215ENST00000600910 SRRQ9GZT4 340 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 SSTR5P35346 364 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 CBX5P45973 191 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 C6orf183Q5T699 404 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 ZNF714Q96N38 554 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 IFT46Q9NQC8 304 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 KLK11Q9UBX7 282 aa16.85■□□□□ 0.29
PNKP-215ENST00000600910 C12orf77C9JDV5 145 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 INHBBP09529 407 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 GZMHP20718 246 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 GZMKP49863 264 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 C5orf24Q7Z6I8 188 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 Q8N402 240 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 PRR18Q8N4B5 295 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 TAF9BQ9HBM6 251 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 TAS2R3Q9NYW6 316 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 CALYQ9NYX4 217 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 KCNIP1Q9NZI2 227 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 ONECUT1Q9UBC0 465 aa16.84■□□□□ 0.29
PNKP-215ENST00000600910 FLNAP21333 2647 aaKnown RBP16.84■□□□□ 0.29
PNKP-215ENST00000600910 KIR2DS1A0A191URI9 304 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 A0A1W2PPH5 198 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 ZNF729A6NN14 1252 aaPredicted RBP16.83■□□□□ 0.28
PNKP-215ENST00000600910 GSTZ1O43708 216 aaPredicted RBP16.83■□□□□ 0.28
PNKP-215ENST00000600910 ZNF728P0DKX0 622 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 CGB3P0DN86 165 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 CGB7P0DN87 165 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 SRSF7Q16629 238 aaKnown RBP eCLIP16.83■□□□□ 0.28
PNKP-215ENST00000600910 C17orf58Q2M2W7 97 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 TRAT1Q6PIZ9 186 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 BTNL3Q6UXE8 466 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 HOGA1Q86XE5 327 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 UBALD1Q8TB05 177 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 ARL11Q969Q4 196 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 COX4I2Q96KJ9 171 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 GAL3ST2Q9H3Q3 398 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 MGAT4AQ9UM21 535 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 CELSR1Q9NYQ6 3014 aa16.83■□□□□ 0.28
PNKP-215ENST00000600910 IGKV1D-8A0A087WSZ0 117 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 KBTBD11-OT1A0A1B0GTJ5 212 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 C15orf65H3BRN8 121 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 ORC5O43913 435 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 RBBP9O75884 186 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 DLX6P56179 175 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 HLA-DRB3P79483 266 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 HMGN3Q15651 99 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 SPNS3Q6ZMD2 512 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 BEST4Q8NFU0 473 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 RFESDQ8TAC1 157 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 TMEM186Q96B77 213 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 DMRTB1Q96MA1 342 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 SDHCQ99643 169 aaPredicted RBP16.82■□□□□ 0.28
PNKP-215ENST00000600910 WDR12Q9GZL7 423 aaKnown RBP16.82■□□□□ 0.28
PNKP-215ENST00000600910 ZNF286AQ9HBT8 521 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 MTFP1Q9UDX5 166 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 OPN4Q9UHM6 478 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 ANAPC10Q9UM13 185 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 INSIG2Q9Y5U4 225 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 ZANQ9Y493 2812 aa16.82■□□□□ 0.28
PNKP-215ENST00000600910 TRDCB7Z8K6 153 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 TGFAP01135 160 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 SCTP09683 121 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 OMGP23515 440 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 ERVFRD-1P60508 538 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 ARF6P62330 175 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 ZNF846Q147U1 533 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 OR52W1Q6IF63 320 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 Q6ZS49 121 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 ZNF554Q86TJ5 538 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 GDPD1Q8N9F7 314 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 SNAPC3Q92966 411 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 TSC22D3Q99576 134 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 THAP7Q9BT49 309 aaPredicted RBP16.81■□□□□ 0.28
PNKP-215ENST00000600910 HIF1ANQ9NWT6 349 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 TRAV20A0A0B4J274 112 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 LANCL1O43813 399 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 HBZP02008 142 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 KIR2DS4P43632 304 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 DVL1P1P54792 670 aaPredicted RBP16.81■□□□□ 0.28
PNKP-215ENST00000600910 ACTBP60709 375 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 ACTG1P63261 375 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 KIR2DS1Q14954 304 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 CYB5R2Q6BCY4 276 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 C11orf42Q8N5U0 333 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 OR1L1Q8NH94 360 aa16.81■□□□□ 0.28
PNKP-215ENST00000600910 RBMX2Q9Y388 322 aaKnown RBP16.81■□□□□ 0.28
PNKP-215ENST00000600910 C17orf98A8MV24 154 aa16.8■□□□□ 0.28
PNKP-215ENST00000600910 NPIPB11E5RHQ5 1161 aa16.8■□□□□ 0.28
PNKP-215ENST00000600910 FABP7O15540 132 aa16.8■□□□□ 0.28
PNKP-215ENST00000600910 SPINT2O43291 252 aa16.8■□□□□ 0.28
PNKP-215ENST00000600910 GSTT2P0CG29 244 aa16.8■□□□□ 0.28
PNKP-215ENST00000600910 GSTT2BP0CG30 244 aa16.8■□□□□ 0.28
PNKP-215ENST00000600910 ZNF16P17020 682 aaPredicted RBP16.8■□□□□ 0.28
PNKP-215ENST00000600910 NAT1P18440 290 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms