RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 ORC5O43913 435 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 CHST1O43916 411 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 CA11O75493 328 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 ARG1P05089 322 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 FUT3P21217 361 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 COX7A1P24310 79 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 FGF9P31371 208 aaPredicted RBP7.07□□□□□ -1.28
SSBP4-208ENST00000600628 KRTAP10-3P60369 221 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 RPS27AP62979 156 aaKnown RBP7.07□□□□□ -1.28
SSBP4-208ENST00000600628 SCN1BQ07699 218 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 HABP2Q14520 560 aaPredicted RBP7.07□□□□□ -1.28
SSBP4-208ENST00000600628 HLA-DRB5Q30154 266 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 Q3ZCU0 254 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 KCTD21Q4G0X4 260 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 OLFML2AQ68BL7 652 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 GLT8D1Q68CQ7 371 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 AWAT2Q6E213 333 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 ZNF880Q6PDB4 577 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 Q6ZPA2 131 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 LIAT1Q6ZQX7 453 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 NR2C2APQ86WQ0 139 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 JAGN1Q8N5M9 183 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 LINC00311Q8N616 119 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 ZNF439Q8NDP4 499 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 OR6M1Q8NGM8 313 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 TMEM203Q969S6 136 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 CITED1Q99966 193 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 TCF7L1Q9HCS4 588 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 CALYQ9NYX4 217 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 PRKDCP78527 4128 aaKnown RBP7.07□□□□□ -1.28
SSBP4-208ENST00000600628 MEIKINA0A087WXM9 373 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 OOSP1A8MZH6 123 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 BUB1B-PAK6H3BSN5 160 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 J3QR06 171 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 PDCD6O75340 191 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 ARL6IP5O75915 188 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 BPNT1O95861 308 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 NAPSAO96009 420 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 HSMCR30P0CW71 290 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 JUNBP17275 347 aaPredicted RBP7.06□□□□□ -1.28
SSBP4-208ENST00000600628 HTR2CP28335 458 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 SSTR5P35346 364 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 KIR2DS4P43632 304 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 ZNF137PP52743 207 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 LGALS4P56470 323 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 TMEM50BP56557 158 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 FBLN7Q53RD9 439 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 PRR31Q5SQ13 230 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 LY6G6FQ5SQ64 297 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 SYT6Q5T7P8 510 aaPredicted RBP7.06□□□□□ -1.28
SSBP4-208ENST00000600628 OR10K2Q6IF99 312 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 RAB12Q6IQ22 244 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 ZNF773Q6PK81 442 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 BRICD5Q6PL45 260 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 OR2W3Q7Z3T1 314 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 OR9G1Q8NH87 305 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 KCNG3Q8TAE7 436 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 ST6GALNAC6Q969X2 333 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 SELENOIQ9C0D9 397 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 CST11Q9H112 138 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 LPAR5Q9H1C0 372 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 BANF2Q9H503 90 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 Q9H521 79 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 RANBP3Q9H6Z4 567 aaPredicted RBP7.06□□□□□ -1.28
SSBP4-208ENST00000600628 ZNF696Q9H7X3 374 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 IDI2-AS1Q9NZ38 188 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 DPM3Q9P2X0 92 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 PSG11Q9UQ72 335 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 TCF19Q9Y242 345 aa7.06□□□□□ -1.28
SSBP4-208ENST00000600628 TRBV6-6A0A0A6YYG2 114 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 TMEM30CPA0ZSE6 113 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 C12orf77C9JDV5 145 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 H3BUI4 141 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 CCRL2O00421 344 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 HSPB6O14558 160 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 CRTAPO75718 401 aaPredicted RBP7.05□□□□□ -1.28
SSBP4-208ENST00000600628 AMY1AP04745 511 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 AMY2AP04746 511 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 HTR1DP28221 377 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 GLP1RP43220 463 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 EFNB2P52799 333 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 RBM39Q14498 530 aaKnown RBP7.05□□□□□ -1.28
SSBP4-208ENST00000600628 SSX2Q16385 188 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 TMEM30BQ3MIR4 351 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 STEAP3Q658P3 488 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 DHRS7BQ6IAN0 325 aaPredicted RBP7.05□□□□□ -1.28
SSBP4-208ENST00000600628 TRAPPC6BQ86SZ2 158 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 SVOPQ8N4V2 548 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 MRPL30Q8TCC3 161 aaKnown RBP7.05□□□□□ -1.28
SSBP4-208ENST00000600628 MRGPRDQ8TDS7 321 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 CFHR4Q92496 578 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 FCGR1BQ92637 280 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 CREB3L1Q96BA8 519 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 S100A13Q99584 98 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 SULT4A1Q9BR01 284 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 CCDC90BQ9GZT6 254 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 MMP28Q9H239 520 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 KCNK15Q9H427 330 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 ZNF702PQ9H963 129 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 HSF4Q9ULV5 492 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms