RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 PPYP01298 95 aa16.84■□□□□ 0.29
PNKP-214ENST00000600573 CYCSP99999 105 aaKnown RBP16.84■□□□□ 0.29
PNKP-214ENST00000600573 IGSF11Q5DX21 431 aa16.84■□□□□ 0.29
PNKP-214ENST00000600573 CCDC71LQ8N9Z2 235 aa16.84■□□□□ 0.29
PNKP-214ENST00000600573 OR5T2Q8NGG2 359 aa16.84■□□□□ 0.29
PNKP-214ENST00000600573 FAM222BQ8WU58 562 aa16.84■□□□□ 0.29
PNKP-214ENST00000600573 TMEM204Q9BSN7 226 aa16.84■□□□□ 0.29
PNKP-214ENST00000600573 MBNL3Q9NUK0 354 aaKnown RBP16.84■□□□□ 0.29
PNKP-214ENST00000600573 USP24Q9UPU5 2620 aa16.83■□□□□ 0.29
PNKP-214ENST00000600573 C3orf80F5H4A9 247 aa16.83■□□□□ 0.28
PNKP-214ENST00000600573 CXCL2P19875 107 aa16.83■□□□□ 0.28
PNKP-214ENST00000600573 GRNP28799 593 aaKnown RBP16.83■□□□□ 0.28
PNKP-214ENST00000600573 SSTR2P30874 369 aa16.83■□□□□ 0.28
PNKP-214ENST00000600573 PIGPP57054 158 aa16.83■□□□□ 0.28
PNKP-214ENST00000600573 RSRP1Q9BUV0 290 aa16.83■□□□□ 0.28
PNKP-214ENST00000600573 NAA60Q9H7X0 242 aa16.83■□□□□ 0.28
PNKP-214ENST00000600573 CISD1Q9NZ45 108 aaKnown RBP16.83■□□□□ 0.28
PNKP-214ENST00000600573 TRAPPC2LQ9UL33 140 aa16.83■□□□□ 0.28
PNKP-214ENST00000600573 PPP1R3CQ9UQK1 317 aa16.83■□□□□ 0.28
PNKP-214ENST00000600573 ARPC5O15511 151 aa16.82■□□□□ 0.28
PNKP-214ENST00000600573 SCTP09683 121 aa16.82■□□□□ 0.28
PNKP-214ENST00000600573 PSG2P11465 335 aa16.82■□□□□ 0.28
PNKP-214ENST00000600573 MUC1P15941 1255 aaPredicted RBP16.82■□□□□ 0.28
PNKP-214ENST00000600573 CDSNQ15517 529 aa16.82■□□□□ 0.28
PNKP-214ENST00000600573 C1orf87Q8N0U7 546 aa16.82■□□□□ 0.28
PNKP-214ENST00000600573 ITLN2Q8WWU7 325 aaPredicted RBP16.82■□□□□ 0.28
PNKP-214ENST00000600573 SNX22Q96L94 193 aa16.82■□□□□ 0.28
PNKP-214ENST00000600573 CABLES2Q9BTV7 478 aa16.82■□□□□ 0.28
PNKP-214ENST00000600573 NMES1Q9C002 83 aa16.82■□□□□ 0.28
PNKP-214ENST00000600573 NCOR1P1Q9H4R4 102 aa16.82■□□□□ 0.28
PNKP-214ENST00000600573 KCNIP1Q9NZI2 227 aa16.82■□□□□ 0.28
PNKP-214ENST00000600573 NPIPB11E5RHQ5 1161 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 BET1O15155 118 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 PSPNO60542 156 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 ZNF205O95201 554 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 SLC25A4P12235 298 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 RPA2P15927 270 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 COL10A1Q03692 680 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 OPCMLQ14982 345 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 ZNF672Q499Z4 452 aaPredicted RBP16.81■□□□□ 0.28
PNKP-214ENST00000600573 TRAT1Q6PIZ9 186 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 FAM185AQ8N0U4 392 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 OR8H1Q8NGG4 311 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 SEC22AQ96IW7 307 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 HEXA-AS1Q9H8Q6 139 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 DYNLRB1Q9NP97 96 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 C13orf42A0A1B0GVH6 325 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.81■□□□□ 0.28
PNKP-214ENST00000600573 HERPUD1Q15011 391 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 TMEM65Q6PI78 240 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 OR5D13Q8NGL4 314 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 PLPPR1Q8TBJ4 325 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 PPP1R1CQ8WVI7 109 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 RTN4IP1Q8WWV3 396 aaPredicted RBP16.81■□□□□ 0.28
PNKP-214ENST00000600573 VRK1Q99986 396 aaPredicted RBP16.81■□□□□ 0.28
PNKP-214ENST00000600573 SLC2A9Q9NRM0 540 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 PRR13Q9NZ81 148 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 KCNIP3Q9Y2W7 256 aa16.81■□□□□ 0.28
PNKP-214ENST00000600573 KMT2BQ9UMN6 2715 aaPredicted RBP16.8■□□□□ 0.28
PNKP-214ENST00000600573 DEFB108AA8MXU0 73 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 TUSC2O75896 110 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 EGR1P18146 543 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 C6orf183Q5T699 404 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 TEX36Q5VZQ5 186 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 C11orf87Q6NUJ2 197 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 C20orf204Q6ZNR8 217 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 ZNF561Q8N587 486 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 CD177Q8N6Q3 437 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 OR10J5Q8NHC4 309 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 GALNT14Q96FL9 552 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 SUCNR1Q9BXA5 334 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 METTL8Q9H825 291 aaKnown RBP16.8■□□□□ 0.28
PNKP-214ENST00000600573 SAP30LQ9HAJ7 183 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 CADP27708 2225 aa16.8■□□□□ 0.28
PNKP-214ENST00000600573 TRBV6-7A0A0A0MS04 114 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 OOEPA6NGQ2 149 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 MGST3O14880 152 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 S100A11P31949 105 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 OR3A1P47881 315 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 UQCRFS1P47985 274 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 ATXN7L3Q14CW9 347 aaPredicted RBP16.79■□□□□ 0.28
PNKP-214ENST00000600573 HMGN3Q15651 99 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 SWI5Q1ZZU3 235 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 MST1LQ2TV78 715 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 PHLDA2Q53GA4 152 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 TEX261Q6UWH6 196 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 TMUB2Q71RG4 321 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 ZNF565Q8N9K5 539 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 RDH8Q9NYR8 311 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 U3KQ87 197 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 ATRXP46100 2492 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 PCNX1Q96RV3 2341 aa16.79■□□□□ 0.28
PNKP-214ENST00000600573 IGKV1D-17A0A075B6S4 117 aa16.78■□□□□ 0.28
PNKP-214ENST00000600573 IGKV1-6A0A0C4DH72 117 aa16.78■□□□□ 0.28
PNKP-214ENST00000600573 ZNF737O75373 536 aa16.78■□□□□ 0.28
PNKP-214ENST00000600573 ADAP1O75689 374 aa16.78■□□□□ 0.28
PNKP-214ENST00000600573 RCC1P18754 421 aaPredicted RBP16.78■□□□□ 0.28
PNKP-214ENST00000600573 LOXP28300 417 aaPredicted RBP16.78■□□□□ 0.28
PNKP-214ENST00000600573 RND3P61587 244 aa16.78■□□□□ 0.28
PNKP-214ENST00000600573 CCL8P80075 99 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms