RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 IFT46Q9NQC8 304 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 ING3Q9NXR8 418 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 ETAA1Q9NY74 926 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 ZNF230Q9UIE0 474 aaPredicted RBP10.48□□□□□ -0.73
UPF1-208ENST00000600012 DOCK11Q5JSL3 2073 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 A0A1B0GW55 424 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 ANKRD20A5PA0PJZ0 165 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 LGALS8O00214 317 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 TMPRSS2O15393 492 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 PLA2G10O15496 165 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 PSPNO60542 156 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 IGHV2-70P01814 119 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 DUX4L2P0CJ85 424 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 DUX4L3P0CJ86 424 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 DUX4L4P0CJ87 422 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 DUX4L5P0CJ88 424 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 DUX4L6P0CJ89 424 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 DUX4L7P0CJ90 424 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 AMY2BP19961 511 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 PRTN3P24158 256 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 ZFP36P26651 326 aaKnown RBP10.47□□□□□ -0.73
UPF1-208ENST00000600012 ACTBP60709 375 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 MRPS15P82914 257 aaKnown RBP10.47□□□□□ -0.73
UPF1-208ENST00000600012 MICBQ29980 383 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 TEX36Q5VZQ5 186 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 DUX4L9Q6RFH8 374 aaPredicted RBP10.47□□□□□ -0.73
UPF1-208ENST00000600012 Q6ZPA2 131 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 SIGLECL1Q8N7X8 197 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 ASCC1Q8N9N2 400 aaKnown RBP10.47□□□□□ -0.73
UPF1-208ENST00000600012 OR4S1Q8NGB4 309 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 ANGPTL6Q8NI99 470 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 C11orf54Q9H0W9 315 aaPredicted RBP10.47□□□□□ -0.73
UPF1-208ENST00000600012 CHMP1AQ9HD42 196 aaPredicted RBP10.47□□□□□ -0.73
UPF1-208ENST00000600012 DUX4Q9UBX2 424 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 NUP50Q9UKX7 468 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 ANAPC10Q9UM13 185 aa10.47□□□□□ -0.73
UPF1-208ENST00000600012 POLR3KQ9Y2Y1 108 aaPredicted RBP10.47□□□□□ -0.73
UPF1-208ENST00000600012 H3BUI4 141 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 IFNL4K9M1U5 179 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 KCNAB3O43448 404 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 MT-ND4P03905 459 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 FCGR3AP08637 254 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 CSF1P09603 554 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 SELLP14151 372 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 LMO1P25800 156 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 CBX5P45973 191 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 OR3A1P47881 315 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 DEFA1P59665 94 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 DEFA3P59666 94 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 SSBP1Q04837 148 aaKnown RBP10.46□□□□□ -0.73
UPF1-208ENST00000600012 ASAH1Q13510 395 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 RBM39Q14498 530 aaKnown RBP10.46□□□□□ -0.73
UPF1-208ENST00000600012 TMEM155Q4W5P6 130 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 OR52W1Q6IF63 320 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 FAAP20Q6NZ36 180 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 C17orf107Q6ZR85 190 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 SETD6Q8TBK2 473 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 SNAPC3Q92966 411 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 GAFA1Q96PS6 74 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 CCL13Q99616 98 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 ST6GALNAC5Q9BVH7 336 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 PATZ1Q9HBE1 687 aaKnown RBP10.46□□□□□ -0.73
UPF1-208ENST00000600012 C12orf4Q9NQ89 552 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 AUP1Q9Y679 476 aa10.46□□□□□ -0.73
UPF1-208ENST00000600012 IGKV1D-8A0A087WSZ0 117 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 TRAV38-1A0A0B4J264 116 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 DNAJC9-AS1A6NH13 148 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 NKX6-3A6NJ46 265 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 A8MXK9 166 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 LYRM1O43325 122 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 ZNF737O75373 536 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 ECDO95905 644 aaPredicted RBP10.45□□□□□ -0.74
UPF1-208ENST00000600012 CD3DP04234 171 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 GLAP06280 429 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 GSTT2BP0CG30 244 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 MUC1P15941 1255 aaPredicted RBP10.45□□□□□ -0.74
UPF1-208ENST00000600012 HLA-DMAP28067 261 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 MDH2P40926 338 aaKnown RBP10.45□□□□□ -0.74
UPF1-208ENST00000600012 TAS2R19P59542 299 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 AP3S2P59780 193 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 ZMYND11Q15326 602 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 RGS21Q2M5E4 152 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 ZNF788Q6ZQV5 615 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 HOGA1Q86XE5 327 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 FAM216BQ8N7L0 139 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 TMEM229BQ8NBD8 167 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 ZNRF1Q8ND25 227 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 OR4K15Q8NH41 348 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 MRPL30Q8TCC3 161 aaKnown RBP10.45□□□□□ -0.74
UPF1-208ENST00000600012 OCSTAMPQ9BR26 566 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 TMEM165Q9HC07 324 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 HRASLSQ9HDD0 168 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 MMP26Q9NRE1 261 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 TAS2R8Q9NYW2 309 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 ZNF69Q9UC07 566 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 MAB21L2Q9Y586 359 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 MEGF8Q7Z7M0 2845 aa10.45□□□□□ -0.74
UPF1-208ENST00000600012 TRAV39A0A0B4J263 110 aa10.44□□□□□ -0.74
UPF1-208ENST00000600012 VGLL3A8MV65 326 aa10.44□□□□□ -0.74
UPF1-208ENST00000600012 M0QYG6 137 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms