RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 RNF115Q9Y4L5 304 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 COX5BP10606 129 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 MSX1P28360 303 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 ERVS71-1P61550 626 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 FAM180AQ6UWF9 173 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 ASCL4Q6XD76 172 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 COLQQ9Y215 455 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 CLEC18AA5D8T8 446 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 TCN2P20062 427 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 HIST1H3AP68431 136 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 RHBDD2Q6NTF9 364 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 ZNF66Q6ZN08 573 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 SLC25A26Q70HW3 274 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 CLEC18CQ8NCF0 446 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 NFAM1Q8NET5 270 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 OR2V1Q8NHB1 315 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 TAAR3PQ9P1P4 343 aa16.6■□□□□ 0.25
ARHGEF1-218ENST00000599589 KIAA2026Q5HYC2 2103 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 PFN1P07737 140 aaKnown RBP16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 OR4A8P0C604 315 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 GZMHP20718 246 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 VDAC1P21796 283 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 EPHA8P29322 1005 aaPredicted RBP16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 CLEC12BQ2HXU8 276 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 TMEM211Q6ICI0 200 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 LHFPL2Q6ZUX7 228 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 ZNF385AQ96PM9 386 aaKnown RBP16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 SNHG12Q9BXW3 62 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 PLSCR2Q9NRY7 297 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 CABIN1Q9Y6J0 2220 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 IGHV3-15A0A0B4J1V0 119 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 RPS18P62269 152 aaKnown RBP16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 OR8B8Q15620 311 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 C10orf128Q5T292 105 aa16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 MAML2Q8IZL2 1156 aaPredicted RBP16.59■□□□□ 0.25
ARHGEF1-218ENST00000599589 OR7C1O76099 320 aaPredicted RBP16.58■□□□□ 0.25
ARHGEF1-218ENST00000599589 COA6Q5JTJ3 125 aaKnown RBP16.58■□□□□ 0.25
ARHGEF1-218ENST00000599589 RABEPKQ7Z6M1 372 aa16.58■□□□□ 0.25
ARHGEF1-218ENST00000599589 ANKRD37Q7Z713 158 aa16.58■□□□□ 0.25
ARHGEF1-218ENST00000599589 WDR5BQ86VZ2 330 aa16.58■□□□□ 0.25
ARHGEF1-218ENST00000599589 OR2M3Q8NG83 312 aa16.58■□□□□ 0.25
ARHGEF1-218ENST00000599589 RNF138Q8WVD3 245 aa16.58■□□□□ 0.25
ARHGEF1-218ENST00000599589 Q9N2K0 584 aa16.58■□□□□ 0.25
ARHGEF1-218ENST00000599589 CNTRLQ7Z7A1 2325 aa16.58■□□□□ 0.24
ARHGEF1-218ENST00000599589 IGKV1D-13A0A0B4J2D9 117 aa16.58■□□□□ 0.24
ARHGEF1-218ENST00000599589 NRASP01111 189 aa16.58■□□□□ 0.24
ARHGEF1-218ENST00000599589 TK1P04183 234 aa16.58■□□□□ 0.24
ARHGEF1-218ENST00000599589 IGKV1-13P0DP09 117 aa16.58■□□□□ 0.24
ARHGEF1-218ENST00000599589 NCR3LG1Q68D85 454 aa16.58■□□□□ 0.24
ARHGEF1-218ENST00000599589 ZNF837Q96EG3 531 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF1-218ENST00000599589 P2RX4Q99571 388 aa16.58■□□□□ 0.24
ARHGEF1-218ENST00000599589 VAX2Q9UIW0 290 aa16.58■□□□□ 0.24
ARHGEF1-218ENST00000599589 DHHO43323 396 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 MMP7P09237 267 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 UCP1P25874 307 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 NPBWR2P48146 333 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 PMS2P11Q13670 270 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 GUSBP11Q6P575 273 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 TMEM54Q969K7 222 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 SMIM7Q9BQ49 75 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 PYGO2Q9BRQ0 406 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 RBKSQ9H477 322 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 EML6Q6ZMW3 1958 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 NR2C1P13056 603 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 HOXA6P31267 233 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 RBM11P57052 281 aaKnown RBP16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 ZNF295-AS1Q8N0V1 137 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 SCGB1C1Q8TD33 95 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 MBD3L1Q8WWY6 194 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 ADGRG7Q96K78 797 aa16.57■□□□□ 0.24
ARHGEF1-218ENST00000599589 A0A0G2JRQ6 117 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 PPP5D1E7EU14 171 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 LCATP04180 440 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 TLE1Q04724 770 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 CCL28Q9NRJ3 127 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 NAT8Q9UHE5 227 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 IGLV3-12A0A075B6K2 115 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 LOC102725191A0A1B0GVB3 256 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 DUXBA0A1W2PPF3 345 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 GALR1P47211 349 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 NUBP1P53384 320 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 PAX5Q02548 391 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 FOXL2NBQ6ZUU3 175 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 OR51G1Q8NGK1 321 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 TMEM37Q8WXS4 190 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 PCGF1Q9BSM1 259 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 ELOVL1Q9BW60 279 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 CBLN4Q9NTU7 201 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 PRSS50Q9UI38 385 aa16.56■□□□□ 0.24
ARHGEF1-218ENST00000599589 IGLV3-32A0A0A0MS00 114 aa16.55■□□□□ 0.24
ARHGEF1-218ENST00000599589 SLC22A20A6NK97 555 aa16.55■□□□□ 0.24
ARHGEF1-218ENST00000599589 SCTP09683 121 aa16.55■□□□□ 0.24
ARHGEF1-218ENST00000599589 IDH3GP51553 393 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-218ENST00000599589 DAZAP2Q15038 168 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-218ENST00000599589 RAB35Q15286 201 aa16.55■□□□□ 0.24
ARHGEF1-218ENST00000599589 SAP25Q8TEE9 199 aa16.55■□□□□ 0.24
ARHGEF1-218ENST00000599589 THOC3Q96J01 351 aaKnown RBP16.55■□□□□ 0.24
ARHGEF1-218ENST00000599589 OR6C1Q96RD1 312 aa16.55■□□□□ 0.24
ARHGEF1-218ENST00000599589 ASCC3Q8N3C0 2202 aaKnown RBP16.55■□□□□ 0.24
ARHGEF1-218ENST00000599589 SOX15O60248 233 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms