RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 MBNL3Q9NUK0 354 aaKnown RBP16.58■□□□□ 0.24
PNKP-211ENST00000598020 A0A087X0M5 115 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 A0A1B0GX30 115 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 POM121CA8CG34 1229 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 NAPSAO96009 420 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 PAHP00439 452 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 CD34P28906 385 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 PLAC9Q5JTB6 97 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 TRAT1Q6PIZ9 186 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 OR10R2Q8NGX6 335 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 MRPL30Q8TCC3 161 aaKnown RBP16.57■□□□□ 0.24
PNKP-211ENST00000598020 ARHGAP5-AS1Q96IT6 56 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 CYYR1Q96J86 154 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 RIMS4Q9H426 269 aaPredicted RBP16.57■□□□□ 0.24
PNKP-211ENST00000598020 OCEL1Q9H607 264 aa16.57■□□□□ 0.24
PNKP-211ENST00000598020 TRBV6-6A0A0A6YYG2 114 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 TRAV39A0A0B4J263 110 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 C15orf65H3BRN8 121 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 SCGNO76038 276 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 GDNFP39905 211 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 MOGAT2Q3SYC2 334 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 C6orf183Q5T699 404 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 PRAMEF5Q5TYX0 476 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 RTN4RL2Q86UN3 420 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 PNKDQ8N490 385 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 CCDC107Q8WV48 283 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 KCTD12Q96CX2 325 aaKnown RBP16.56■□□□□ 0.24
PNKP-211ENST00000598020 RAB3CQ96E17 227 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 KIRREL1Q96J84 757 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 ZNF48Q96MX3 618 aaPredicted RBP16.56■□□□□ 0.24
PNKP-211ENST00000598020 PECRQ9BY49 303 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 TRAPPC2LQ9UL33 140 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 SPATA2Q9UM82 520 aa16.56■□□□□ 0.24
PNKP-211ENST00000598020 SOX21Q9Y651 276 aaPredicted RBP16.56■□□□□ 0.24
PNKP-211ENST00000598020 ODF3BA8MYP8 253 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 TCF21O43680 179 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 OMGP23515 440 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 COX7A1P24310 79 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 SSTR5P35346 364 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 TMBIM6P55061 237 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 HILS1P60008 231 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 ZNF626Q68DY1 528 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 ZNF880Q6PDB4 577 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 CLVS1Q8IUQ0 354 aaPredicted RBP16.55■□□□□ 0.24
PNKP-211ENST00000598020 OR5H6Q8NGV6 325 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 OR4K15Q8NH41 348 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 RAB2BQ8WUD1 216 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 CLEC7AQ9BXN2 247 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 ATG5Q9H1Y0 275 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 RAB9BQ9NP90 201 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 RHBDL2Q9NX52 303 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 IDI2-AS1Q9NZ38 188 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 KCNK7Q9Y2U2 307 aa16.55■□□□□ 0.24
PNKP-211ENST00000598020 IGHV2-26A0A0B4J1V2 119 aa16.54■□□□□ 0.24
PNKP-211ENST00000598020 SAA4P35542 130 aa16.54■□□□□ 0.24
PNKP-211ENST00000598020 DYNC1I2Q13409 638 aaKnown RBP16.54■□□□□ 0.24
PNKP-211ENST00000598020 ARL6IP1Q15041 203 aa16.54■□□□□ 0.24
PNKP-211ENST00000598020 DEFB112Q30KQ8 113 aa16.54■□□□□ 0.24
PNKP-211ENST00000598020 RBMS3Q6XE24 437 aaKnown RBP16.54■□□□□ 0.24
PNKP-211ENST00000598020 SIGLECL1Q8N7X8 197 aa16.54■□□□□ 0.24
PNKP-211ENST00000598020 OR52M1Q8NGK5 317 aa16.54■□□□□ 0.24
PNKP-211ENST00000598020 ARL11Q969Q4 196 aa16.54■□□□□ 0.24
PNKP-211ENST00000598020 AJUBAQ96IF1 538 aa16.54■□□□□ 0.24
PNKP-211ENST00000598020 JMJD8Q96S16 334 aa16.54■□□□□ 0.24
PNKP-211ENST00000598020 DCSTAMPQ9H295 470 aa16.54■□□□□ 0.24
PNKP-211ENST00000598020 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.54■□□□□ 0.24
PNKP-211ENST00000598020 AK3Q9UIJ7 227 aa16.54■□□□□ 0.24
PNKP-211ENST00000598020 A0A0U1RQK1 487 aa16.53■□□□□ 0.24
PNKP-211ENST00000598020 SERPINE3A8MV23 424 aa16.53■□□□□ 0.24
PNKP-211ENST00000598020 C12orf77C9JDV5 145 aa16.53■□□□□ 0.24
PNKP-211ENST00000598020 F2RL2O00254 374 aa16.53■□□□□ 0.24
PNKP-211ENST00000598020 MFNGO00587 321 aa16.53■□□□□ 0.24
PNKP-211ENST00000598020 HIST1H1DP16402 221 aaKnown RBP16.53■□□□□ 0.24
PNKP-211ENST00000598020 RCC1P18754 421 aaPredicted RBP16.53■□□□□ 0.24
PNKP-211ENST00000598020 TMEM30BQ3MIR4 351 aa16.53■□□□□ 0.24
PNKP-211ENST00000598020 ABHD12Q8N2K0 398 aa16.53■□□□□ 0.24
PNKP-211ENST00000598020 RFESDQ8TAC1 157 aa16.53■□□□□ 0.24
PNKP-211ENST00000598020 SLC25A38Q96DW6 304 aa16.53■□□□□ 0.24
PNKP-211ENST00000598020 TBL2Q9Y4P3 447 aaKnown RBP16.53■□□□□ 0.24
PNKP-211ENST00000598020 A0A0A6YYH2 397 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 A0A1W2PRD5 423 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 A0A1W2PRF3 423 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 A0A1W2PRM7 423 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 MEIOCA2RUB1 952 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 A6NJ64 397 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 RORCP51449 518 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 KRTAP21-3Q3LHN1 58 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 BAIAP2L2Q6UXY1 529 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 Q6YL49 198 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 MOB1BQ7L9L4 216 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 LDLRAD3Q86YD5 345 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 NDNFQ8TB73 568 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 ABCG5Q9H222 651 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 C12orf4Q9NQ89 552 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 KCNIP1Q9NZI2 227 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 FAM96BQ9Y3D0 163 aa16.52■□□□□ 0.24
PNKP-211ENST00000598020 CUBNO60494 3623 aa16.52■□□□□ 0.23
PNKP-211ENST00000598020 ATRQ13535 2644 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 SPINT2O43291 252 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 IGLV1-47P01700 117 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms