RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 ZNF816Q0VGE8 651 aaPredicted RBP13.42□□□□□ -0.26
PNKP-210ENST00000597965 HNF4GQ14541 408 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 PNLIPRP3Q17RR3 467 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 CXorf66Q5JRM2 361 aaPredicted RBP13.42□□□□□ -0.26
PNKP-210ENST00000597965 C6orf141Q5SZD1 244 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 C9orf66Q5T8R8 295 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 LAIR2Q6ISS4 152 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 TSPAN14Q8NG11 270 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 OR13A1Q8NGR1 328 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 PELI1Q96FA3 418 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 C4orf36Q96KX1 117 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 GPER1Q99527 375 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 LIN7CQ9NUP9 197 aaKnown RBP13.42□□□□□ -0.26
PNKP-210ENST00000597965 DHDHQ9UQ10 334 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 GMPPBQ9Y5P6 360 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 U3KQK5 164 aa13.42□□□□□ -0.26
PNKP-210ENST00000597965 TRIM64CA6NLI5 447 aa13.41□□□□□ -0.26
PNKP-210ENST00000597965 NCBP2LA6PVI3 153 aaKnown RBP13.41□□□□□ -0.26
PNKP-210ENST00000597965 CCRL2O00421 344 aa13.41□□□□□ -0.26
PNKP-210ENST00000597965 HSD17B6O14756 317 aa13.41□□□□□ -0.26
PNKP-210ENST00000597965 RAB3AP20336 220 aa13.41□□□□□ -0.26
PNKP-210ENST00000597965 RAB25P57735 213 aa13.41□□□□□ -0.26
PNKP-210ENST00000597965 SNRPGP62308 76 aaKnown RBP13.41□□□□□ -0.26
PNKP-210ENST00000597965 EBI3Q14213 229 aa13.41□□□□□ -0.26
PNKP-210ENST00000597965 RSU1Q15404 277 aa13.41□□□□□ -0.26
PNKP-210ENST00000597965 SYS1Q8N2H4 156 aa13.41□□□□□ -0.26
PNKP-210ENST00000597965 SETD9Q8NE22 299 aa13.41□□□□□ -0.26
PNKP-210ENST00000597965 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
PNKP-210ENST00000597965 OR10AC1Q8NH08 325 aa13.41□□□□□ -0.26
PNKP-210ENST00000597965 CHCHD3Q9NX63 227 aaKnown RBP13.41□□□□□ -0.26
PNKP-210ENST00000597965 TRAV24A0A0B4J272 114 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 TFAP2AP05549 437 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 ELANEP08246 267 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 IL3RAP26951 378 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 CDX1P47902 265 aaPredicted RBP13.4□□□□□ -0.26
PNKP-210ENST00000597965 GNG10P50151 68 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 FOXE3Q13461 319 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 GALEQ14376 348 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 LTC4SQ16873 150 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 RBM48Q5RL73 367 aaKnown RBP13.4□□□□□ -0.26
PNKP-210ENST00000597965 RSBN1Q5VWQ0 802 aaPredicted RBP13.4□□□□□ -0.26
PNKP-210ENST00000597965 MOB3BQ86TA1 216 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 IZUMO1Q8IYV9 350 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 OR8H1Q8NGG4 311 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 OR52M1Q8NGK5 317 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 OR5AK2Q8NH90 309 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 MRGPRDQ8TDS7 321 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 TSEN15Q8WW01 171 aaKnown RBP13.4□□□□□ -0.26
PNKP-210ENST00000597965 LEAP2Q969E1 77 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 ABCG5Q9H222 651 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 RAB9BQ9NP90 201 aa13.4□□□□□ -0.26
PNKP-210ENST00000597965 EXOGQ9Y2C4 368 aaKnown RBP13.4□□□□□ -0.26
PNKP-210ENST00000597965 IGHV1-3A0A0C4DH29 117 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 TXNL1O43396 289 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 IGHV3-7P01780 117 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 CD2P06729 351 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 RPL5P46777 297 aaKnown RBP13.39□□□□□ -0.27
PNKP-210ENST00000597965 GPR50Q13585 617 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 KIR2DS1Q14954 304 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 LINC00596Q86U02 117 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 C8orf31Q8N9H6 132 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 RFESDQ8TAC1 157 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 TNFAIP8L1Q8WVP5 186 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 RAX2Q96IS3 184 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 S100A13Q99584 98 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 ALG8Q9BVK2 526 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 DPCDQ9BVM2 203 aaPredicted RBP13.39□□□□□ -0.27
PNKP-210ENST00000597965 FAM192AQ9GZU8 254 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 PAK1IP1Q9NWT1 392 aaPredicted RBP13.39□□□□□ -0.27
PNKP-210ENST00000597965 LINC00527Q9UJ94 153 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 DNAH9Q9NYC9 4486 aa13.39□□□□□ -0.27
PNKP-210ENST00000597965 A0A087WXM4 84 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 C3orf84H3BNL1 204 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 FADS2O95864 444 aaKnown RBP13.38□□□□□ -0.27
PNKP-210ENST00000597965 CSTBP04080 98 aaKnown RBP13.38□□□□□ -0.27
PNKP-210ENST00000597965 OR5H8P0DN80 308 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 CRHBPP24387 322 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 SSTR5P35346 364 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 GPR12P47775 334 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 Q3ZCU0 254 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 UTF1Q5T230 341 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 C18orf65Q6ZTR6 163 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 SATL1Q86VE3 508 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 LINC00311Q8N616 119 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 RNF152Q8N8N0 203 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 Q8NFD4 153 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 EAF1Q96JC9 268 aaPredicted RBP13.38□□□□□ -0.27
PNKP-210ENST00000597965 Q96MT0 163 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 RASL11BQ9BPW5 248 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 JAM3Q9BX67 310 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 IFT22Q9H7X7 185 aa13.38□□□□□ -0.27
PNKP-210ENST00000597965 TMEM30CPA0ZSE6 113 aa13.37□□□□□ -0.27
PNKP-210ENST00000597965 MOSP00540 346 aa13.37□□□□□ -0.27
PNKP-210ENST00000597965 VDAC1P21796 283 aa13.37□□□□□ -0.27
PNKP-210ENST00000597965 CD1BP29016 333 aa13.37□□□□□ -0.27
PNKP-210ENST00000597965 ALDH3B2P48448 385 aa13.37□□□□□ -0.27
PNKP-210ENST00000597965 GBX2P52951 348 aaPredicted RBP13.37□□□□□ -0.27
PNKP-210ENST00000597965 DIAPH2-AS1Q14236 149 aa13.37□□□□□ -0.27
PNKP-210ENST00000597965 LCNL1Q6ZST4 164 aa13.37□□□□□ -0.27
PNKP-210ENST00000597965 SUMF2Q8NBJ7 301 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms