RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 B9D2Q9BPU9 175 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.29□□□□□ -1.08
LSM4-205ENST00000597776 ZFP57Q9NU63 452 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 FAM118AQ9NWS6 357 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 ING4Q9UNL4 249 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 IGHV3-43A0A0B4J1X8 118 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 A0A1W2PP11 408 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 TMEM30CPA0ZSE6 113 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 NCBP2LA6PVI3 153 aaKnown RBP8.28□□□□□ -1.08
LSM4-205ENST00000597776 ZNF736B4DX44 427 aaPredicted RBP8.28□□□□□ -1.08
LSM4-205ENST00000597776 C15orf65H3BRN8 121 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 CCL24O00175 119 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 SDCBPO00560 298 aaPredicted RBP8.28□□□□□ -1.08
LSM4-205ENST00000597776 GAPDHP04406 335 aaKnown RBP8.28□□□□□ -1.08
LSM4-205ENST00000597776 RPLP1P05386 114 aaKnown RBP8.28□□□□□ -1.08
LSM4-205ENST00000597776 IGHV3-43DP0DP04 118 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 SERPINA2P20848 420 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 MYCNOSP40205 109 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 GPR12P47775 334 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 ETV1P50549 477 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 LUMP51884 338 aaPredicted RBP8.28□□□□□ -1.08
LSM4-205ENST00000597776 SLC35B1P78383 322 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 EBI3Q14213 229 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 SMN1Q16637 294 aaKnown RBP8.28□□□□□ -1.08
LSM4-205ENST00000597776 DDI2Q5TDH0 399 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 ZFP1Q6P2D0 407 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 SLC16A12Q6ZSM3 486 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 ZNF695Q8IW36 515 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 IZUMO1Q8IYV9 350 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 COMMD1Q8N668 190 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 Q8N6K4 173 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 Q8N9W7 124 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 OR10A7Q8NGE5 316 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 OR13C5Q8NGS8 318 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 OR52N1Q8NH53 320 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 GPR148Q8TDV2 347 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 TFAP2CQ92754 450 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 ARL11Q969Q4 196 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 TMEM106AQ96A25 262 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 Q96MT0 163 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 SLC29A1Q99808 456 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 MCRIP2Q9BUT9 160 aaKnown RBP8.28□□□□□ -1.08
LSM4-205ENST00000597776 IFT22Q9H7X7 185 aa8.28□□□□□ -1.08
LSM4-205ENST00000597776 SIRT4Q9Y6E7 314 aaPredicted RBP8.28□□□□□ -1.08
LSM4-205ENST00000597776 LOC100130705A0A1B0GUX0 176 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 MAGEA13PA6NCF6 341 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 H0YHG0 523 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 AP4M1O00189 453 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 SLC31A2O15432 143 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 MPZL2O60487 215 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 CSTBP04080 98 aaKnown RBP8.27□□□□□ -1.09
LSM4-205ENST00000597776 CD2P06729 351 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 SLC6A1P30531 599 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 ZNF93P35789 620 aaPredicted RBP8.27□□□□□ -1.09
LSM4-205ENST00000597776 PPP3R1P63098 170 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 SLC22A6Q4U2R8 563 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 NHLRC3Q5JS37 347 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 ATAD3CQ5T2N8 411 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 OR2G6Q5TZ20 316 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 TEX38Q6PEX7 206 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 TGIF2LXQ8IUE1 241 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 TMEM104Q8NE00 496 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 OR2T10Q8NGZ9 312 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 NEK7Q8TDX7 302 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 RTN4IP1Q8WWV3 396 aaPredicted RBP8.27□□□□□ -1.09
LSM4-205ENST00000597776 METTL9Q9H1A3 318 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 ABCG5Q9H222 651 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 TMEM138Q9NPI0 162 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 MRPS18AQ9NVS2 196 aaKnown RBP8.27□□□□□ -1.09
LSM4-205ENST00000597776 GFOD1Q9NXC2 390 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 IL36GQ9NZH8 169 aa8.27□□□□□ -1.09
LSM4-205ENST00000597776 RPL36Q9Y3U8 105 aaKnown RBP8.27□□□□□ -1.09
LSM4-205ENST00000597776 WBP4O75554 376 aaKnown RBP8.26□□□□□ -1.09
LSM4-205ENST00000597776 MT-ND4P03905 459 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 GZMHP20718 246 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 BDKRB2P30411 391 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 DGCR2P98153 550 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 GPR50Q13585 617 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 PNLIPRP3Q17RR3 467 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 KLHL22Q53GT1 634 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 RPL22L1Q6P5R6 122 aaKnown RBP8.26□□□□□ -1.09
LSM4-205ENST00000597776 UNQ9370/PRO34162Q6UXP9 181 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 ZNF497Q6ZNH5 498 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 LINC00311Q8N616 119 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 OR10V1Q8NGI7 309 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 OR52M1Q8NGK5 317 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 ST6GALNAC6Q969X2 333 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 CYYR1Q96J86 154 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 WWC2-AS2Q96NR7 200 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 ZNF184Q99676 751 aaPredicted RBP8.26□□□□□ -1.09
LSM4-205ENST00000597776 HSPB9Q9BQS6 159 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 C9orf16Q9BUW7 83 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 DCLRE1BQ9H816 532 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 FGF20Q9NP95 211 aaPredicted RBP8.26□□□□□ -1.09
LSM4-205ENST00000597776 PLSCR3Q9NRY6 295 aa8.26□□□□□ -1.09
LSM4-205ENST00000597776 LIN7CQ9NUP9 197 aaKnown RBP8.26□□□□□ -1.09
LSM4-205ENST00000597776 TRAV8-7A0A075B6U6 113 aa8.25□□□□□ -1.09
LSM4-205ENST00000597776 C12orf77C9JDV5 145 aa8.25□□□□□ -1.09
LSM4-205ENST00000597776 AIPO00170 330 aa8.25□□□□□ -1.09
LSM4-205ENST00000597776 MOSP00540 346 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms