RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 ARSJQ5FYB0 599 aaPredicted RBP10.4□□□□□ -0.74
LIG1-212ENST00000596549 SAMD5Q5TGI4 173 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 GLIPR1L1Q6UWM5 242 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 ZNF497Q6ZNH5 498 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 JAGN1Q8N5M9 183 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 OR56B4Q8NH76 319 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 NRG4Q8WWG1 115 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 RPEQ96AT9 228 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 CREB3L1Q96BA8 519 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 S100A13Q99584 98 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 CKLFQ9UBR5 152 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 LSM2Q9Y333 95 aaKnown RBP10.4□□□□□ -0.74
LIG1-212ENST00000596549 AMMECR1Q9Y4X0 333 aaPredicted RBP10.4□□□□□ -0.74
LIG1-212ENST00000596549 A0A1W2PPE3 182 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 CDK1P06493 297 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 LPLP06858 475 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 SNRNP70P08621 437 aaKnown RBP10.39□□□□□ -0.75
LIG1-212ENST00000596549 MNDAP41218 407 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 ARHGDIBP52566 201 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 AQP4P55087 323 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 GP2P55259 537 aaKnown RBP10.39□□□□□ -0.75
LIG1-212ENST00000596549 BEAN1Q3B7T3 259 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 TCTEX1D4Q5JR98 221 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 ATAD3CQ5T2N8 411 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 FAM27D1Q5T7N8 215 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 AWAT2Q6E213 333 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 CCDC144NLQ6NUI1 221 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 C10orf99Q6UWK7 81 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 TMEM104Q8NE00 496 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 OR10A7Q8NGE5 316 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 AKR1E2Q96JD6 320 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 BANF2Q9H503 90 aa10.39□□□□□ -0.75
LIG1-212ENST00000596549 IGHV3-43A0A0B4J1X8 118 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 AIPO00170 330 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 IGHV3-43DP0DP04 118 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 MGMTP16455 207 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 VHLP40337 213 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 LOXL3P58215 753 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 MADCAM1Q13477 382 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 SIGIRRQ6IA17 410 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 GAPTQ8N292 157 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 DRAM1Q8N682 238 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 NKAIN3Q8N8D7 197 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 NEK7Q8TDX7 302 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 CCDC107Q8WV48 283 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 CAPSLQ8WWF8 208 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 Q96M66 194 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 VCXQ9H320 206 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 DCLRE1BQ9H816 532 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 MOB4Q9Y3A3 225 aa10.38□□□□□ -0.75
LIG1-212ENST00000596549 C12orf77C9JDV5 145 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 SDCBPO00560 298 aaPredicted RBP10.37□□□□□ -0.75
LIG1-212ENST00000596549 HSD17B6O14756 317 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 SLC31A2O15432 143 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 PEX14O75381 377 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 SC5DO75845 299 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 MT-ND4P03905 459 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 RAB7AP51149 207 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 CD83Q01151 205 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 ZNF816Q0VGE8 651 aaPredicted RBP10.37□□□□□ -0.75
LIG1-212ENST00000596549 GPR176Q14439 515 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 C6orf141Q5SZD1 244 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 KPRPQ5T749 579 aaPredicted RBP10.37□□□□□ -0.75
LIG1-212ENST00000596549 RNLSQ5VYX0 342 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 SLC16A12Q6ZSM3 486 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 CDH26Q8IXH8 852 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 OR8H3Q8N146 312 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 C5orf56Q8N8D9 126 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 OR5AU1Q8NGC0 362 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 OR4K15Q8NH41 348 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 ARL11Q969Q4 196 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 MRPS24Q96EL2 167 aaKnown RBP10.37□□□□□ -0.75
LIG1-212ENST00000596549 MND1Q9BWT6 205 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 KCNK15Q9H427 330 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 PCDHB16Q9NRJ7 776 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 GFOD1Q9NXC2 390 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 ERGIC3Q9Y282 383 aa10.37□□□□□ -0.75
LIG1-212ENST00000596549 A0A1W2PRX2 142 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 ORC5O43913 435 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 IGKV1D-33P01593 117 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 IGKV1-33P01594 117 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 MAPK3P27361 379 aaPredicted RBP10.36□□□□□ -0.75
LIG1-212ENST00000596549 REG1BP48304 166 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 SLC35A2P78381 396 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 GABPB1Q06547 395 aaPredicted RBP10.36□□□□□ -0.75
LIG1-212ENST00000596549 IRF3Q14653 427 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 SYT6Q5T7P8 510 aaPredicted RBP10.36□□□□□ -0.75
LIG1-212ENST00000596549 RAB12Q6IQ22 244 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 UNQ9370/PRO34162Q6UXP9 181 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 LRRTM1Q86UE6 522 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 THNSL2Q86YJ6 484 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 LINC00311Q8N616 119 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 ZNF439Q8NDP4 499 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 OR52M1Q8NGK5 317 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 OR10X1Q8NGY0 326 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 THRSPQ92748 146 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 FAM46BQ96A09 425 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 R3HDM4Q96D70 268 aa10.36□□□□□ -0.75
LIG1-212ENST00000596549 RBMXL1Q96E39 390 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms