RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TSPAN5P62079 268 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 EDDM3AQ14507 147 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 KIR2DS1Q14954 304 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 OXA1LQ15070 435 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 CDK10Q15131 360 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 AVPI1Q5T686 147 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 RSBN1Q5VWQ0 802 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 ZNF880Q6PDB4 577 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 LYPD2Q6UXB3 125 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 CCBE1Q6UXH8 406 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 Q6ZS49 121 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 MOB1BQ7L9L4 216 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 TMEM17Q86X19 198 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 IGFBPL1Q8WX77 278 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 SNAPC3Q92966 411 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 TINAGL1Q9GZM7 467 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 SCP2D1Q9UJQ7 156 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 IGKV1D-8A0A087WSZ0 117 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 TRAV39A0A0B4J263 110 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 RNF212BA8MTL3 300 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 WIPF1O43516 503 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 SSX4O60224 188 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 IGHV2-70P01814 119 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 CTXN2P0C2S0 81 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 SPNP16150 400 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 NDUFB7P17568 137 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 GPR6P46095 362 aaPredicted RBP10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 GLIPR1P48060 266 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 EDDM3BP56851 147 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 SEC61A1P61619 476 aaKnown RBP10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 LRRC10Q5BKY1 277 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 VAX1Q5SQQ9 334 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 FAAP20Q6NZ36 180 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 PLET1Q6UQ28 207 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 GAPTQ8N292 157 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 FAM216BQ8N7L0 139 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 DUSP18Q8NEJ0 188 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 OR4D10Q8NGI6 311 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 OR56B4Q8NH76 319 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 MBD6Q96DN6 1003 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 COQ2Q96H96 371 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 NCOR1P1Q9H4R4 102 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 OCEL1Q9H607 264 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 BARX1Q9HBU1 254 aaPredicted RBP10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 NECAP2Q9NVZ3 263 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 EHFQ9NZC4 300 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 KAAG1Q9UBP8 84 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 SLC25A10Q9UBX3 287 aaPredicted RBP10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 KIF25Q9UIL4 384 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 PCDHB10Q9UN67 800 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 TANC2Q9HCD6 1990 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 HIVEP2P31629 2446 aa10.86□□□□□ -0.67
SHKBP1-209ENST00000595803 A0A1B0GW55 424 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 VGLL3A8MV65 326 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 INAFM1C9JVW0 142 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 SDCBPO00560 298 aaPredicted RBP10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 FABP7O15540 132 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 SCTP09683 121 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 ZNF735P0CB33 412 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 DUX4L2P0CJ85 424 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 DUX4L3P0CJ86 424 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 DUX4L4P0CJ87 422 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 DUX4L5P0CJ88 424 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 DUX4L6P0CJ89 424 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 DUX4L7P0CJ90 424 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 SELLP14151 372 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 RCC1P18754 421 aaPredicted RBP10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 GZMHP20718 246 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 ERP29P30040 261 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 SLC6A1P30531 599 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 PDLIM4P50479 330 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 CCR6P51684 374 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 P2RX3P56373 397 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 SCGB2B2Q4G0G5 96 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 TMEM155Q4W5P6 130 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 C6orf183Q5T699 404 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 TRAT1Q6PIZ9 186 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 DUX4L9Q6RFH8 374 aaPredicted RBP10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 TPRX1Q8N7U7 411 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 ZNF565Q8N9K5 539 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 OR51S1Q8NGJ8 323 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 SLC6A7Q99884 636 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 PRRT1Q99946 306 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 COPZ2Q9P299 210 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 DUX4Q9UBX2 424 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 MIOXQ9UGB7 285 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 CUBNO60494 3623 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 ZANQ9Y493 2812 aa10.85□□□□□ -0.67
SHKBP1-209ENST00000595803 ODAMA1E959 279 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 DVL1O14640 695 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 IGHV4-39P01824 125 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 TCRBP04435 133 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 OR5H8P0DN80 308 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 GLP1RP43220 463 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 ATP5J2P56134 94 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 HLA-DRB3P79483 266 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 PAX5Q02548 391 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 PLA1AQ53H76 456 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 Q6ZPA2 131 aa10.84□□□□□ -0.67
SHKBP1-209ENST00000595803 OVCH2Q7RTZ1 564 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms