RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ORAI1Q96D31 301 aa10.77□□□□□ -0.69
SHKBP1-208ENST00000595726 RBMXL1Q96E39 390 aaKnown RBP10.77□□□□□ -0.69
SHKBP1-208ENST00000595726 LINC00312Q9Y6C7 94 aa10.77□□□□□ -0.69
SHKBP1-208ENST00000595726 KIAA1109Q2LD37 5005 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 PNMA8CA0A1B0GUJ8 204 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 hADV38S2A0JD32 116 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 RRP9O43818 475 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 ZNF44P15621 663 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 IGFBP3P17936 291 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 ERP29P30040 261 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 MTNR1BP49286 362 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 P2RX3P56373 397 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 Q499Y3 187 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 ELP2Q6IA86 826 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 Q6P435 159 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 SATL1Q86VE3 508 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 ABHD12Q8N2K0 398 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 TNFAIP8L1Q8WVP5 186 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 GPER1Q99527 375 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 FAM192AQ9GZU8 254 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 TMEM138Q9NPI0 162 aa10.76□□□□□ -0.69
SHKBP1-208ENST00000595726 M0QZK8 103 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 SLC33A1O00400 549 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 CSN2P05814 226 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 CDK1P06493 297 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 FSTP19883 344 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 BDKRB2P30411 391 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 PPP3R1P63098 170 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 RIPK1Q13546 671 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 KIR2DS1Q14954 304 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 C6orf141Q5SZD1 244 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 DDI2Q5TDH0 399 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 NANOGP1Q8N7R0 232 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 CHST4Q8NCG5 386 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 OR10K1Q8NGX5 313 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 OR14A2Q96R54 314 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 TM2D3Q9BRN9 247 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 PAK1IP1Q9NWT1 392 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 MOB4Q9Y3A3 225 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 DNAH10Q8IVF4 4471 aa10.75□□□□□ -0.69
SHKBP1-208ENST00000595726 TRAV8-7A0A075B6U6 113 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 TRBV5-7A0A0A0MS05 114 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 MAGEA13PA6NCF6 341 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 TRIM64CA6NLI5 447 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 GPX5O75715 221 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 CD1AP06126 327 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 CELP19835 753 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 ZNF93P35789 620 aaPredicted RBP10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 PTGFRP43088 359 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 SLC35B1P78383 322 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 BDH1Q02338 343 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 SCN1BQ07699 218 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 AESQ08117 197 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 ATXN7L3Q14CW9 347 aaPredicted RBP10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 PRAMEF5Q5TYX0 476 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 RNLSQ5VYX0 342 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 ASCL4Q6XD76 172 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 OR51T1Q8NGJ9 327 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 OR8U1Q8NH10 309 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 ANKRD60Q9BZ19 345 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 ERGIC3Q9Y282 383 aa10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 UBE2J1Q9Y385 318 aaPredicted RBP10.74□□□□□ -0.69
SHKBP1-208ENST00000595726 LEUTXA8MZ59 168 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 DEGS1O15121 323 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 CDRT1O95170 752 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 IGLV1-47P01700 117 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 MYF6P23409 242 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 GLIPR1P48060 266 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 VEGFCP49767 419 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 HNF4GQ14541 408 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 IL13RA2Q14627 380 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 RSU1Q15404 277 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 PIGYQ3MUY2 71 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 UTF1Q5T230 341 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 TPTE2P1Q5T6R2 138 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 TRAPPC6BQ86SZ2 158 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 STPG2Q8N412 459 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 COMMD1Q8N668 190 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 C5orf56Q8N8D9 126 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 COQ2Q96H96 371 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 DERL3Q96Q80 235 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 NR1H4Q96RI1 486 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 ZNF184Q99676 751 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 MND1Q9BWT6 205 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 IL36GQ9NZH8 169 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 CKLFQ9UBR5 152 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 LSM2Q9Y333 95 aaKnown RBP10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 KIAA2026Q5HYC2 2103 aa10.73□□□□□ -0.69
SHKBP1-208ENST00000595726 TRGV10A0A0A0MS01 117 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 TRAV24A0A0B4J272 114 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 A0A1W2PPK0 400 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 ODAMA1E959 279 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 FUOMA2VDF0 154 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 PTGES3LE9PB15 166 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 HSPB6O14558 160 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 HTR3BO95264 441 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 FAM106CPP0CH98 169 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 SPNP16150 400 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 GDNFP39905 211 aa10.72□□□□□ -0.69
SHKBP1-208ENST00000595726 ARHGDIBP52566 201 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms