RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 RBM48Q5RL73 367 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 TRAT1Q6PIZ9 186 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 PRSS48Q7RTY5 328 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 LYPD6Q86Y78 171 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 OR52M1Q8NGK5 317 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 RPEQ96AT9 228 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 OR5M11Q96RB7 305 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 TMED9Q9BVK6 235 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 KIAA2026Q5HYC2 2103 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 FAM172BPA6NC97 362 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 J3QR06 171 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 AIPO00170 330 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 PEX14O75381 377 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 CRTAPO75718 401 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 CRHBPP24387 322 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 SSTR5P35346 364 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 KRTAP10-3P60369 221 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 MLLT11Q13015 90 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 MADCAM1Q13477 382 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 TPBGQ13641 420 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 Q3ZCU0 254 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 ARSJQ5FYB0 599 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 C6orf183Q5T699 404 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 RAB12Q6IQ22 244 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 BAIAP2L2Q6UXY1 529 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 ZNF497Q6ZNH5 498 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 TMEM219Q86XT9 240 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 TOMM40LQ969M1 308 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 SELENOIQ9C0D9 397 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 ZNF702PQ9H963 129 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 RAB26Q9ULW5 256 aa14.26□□□□□ -0.13
SHKBP1-204ENST00000594862 TGP01266 2768 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 A0A1W2PP11 408 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 LY6LH3BQJ8 138 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 M0QZK8 103 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 SC5DO75845 299 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 ARL6IP5O75915 188 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 UCHL1P09936 223 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 RAB7AP51149 207 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 CCBE1Q6UXH8 406 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 CEACAM19Q7Z692 300 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 KLHDC1Q8N7A1 406 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 C8orf31Q8N9H6 132 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 Q96M66 194 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 CCDC90BQ9GZT6 254 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 ETAA1Q9NY74 926 aa14.25□□□□□ -0.13
SHKBP1-204ENST00000594862 KCNAB3O43448 404 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 MT-ND4P03905 459 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 FAM106CPP0CH98 169 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 SRMP19623 302 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 FUT3P21217 361 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 C1orf100Q5SVJ3 147 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 LIPKQ5VXJ0 399 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 ZNF554Q86TJ5 538 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 OR8H3Q8N146 312 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 OR10X1Q8NGY0 326 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 ARL11Q969Q4 196 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 PSG11Q9UQ72 335 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 SIGLEC9Q9Y336 463 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 PEX16Q9Y5Y5 336 aa14.24□□□□□ -0.13
SHKBP1-204ENST00000594862 SDCBPO00560 298 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 SPINT2O43291 252 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 PDCD6O75340 191 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 OR2F2O95006 317 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 HSMCR30P0CW71 290 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 IL3RAP26951 378 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 TBCEQ15813 527 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 LRRTM1Q86UE6 522 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 THNSL2Q86YJ6 484 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 GAPTQ8N292 157 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 TMEM104Q8NE00 496 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 OR6M1Q8NGM8 313 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 RFESDQ8TAC1 157 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 KCNG3Q8TAE7 436 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 CFHR4Q92496 578 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 CNBD2Q96M20 576 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 BANF2Q9H503 90 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 Q9H521 79 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 ZNF581Q9P0T4 197 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 TRAPPC2LQ9UL33 140 aa14.23□□□□□ -0.13
SHKBP1-204ENST00000594862 TET2Q6N021 2002 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 C15orf65H3BRN8 121 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 BPNT1O95861 308 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 LPLP06858 475 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 CSF1P09603 554 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 VSIG10L2P0DP72 767 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 CPEP16870 476 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 HTR2CP28335 458 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 VHLP40337 213 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 VDAC2P45880 294 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 GNG10P50151 68 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 LTC4SQ16873 150 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 ZNF367Q7RTV3 350 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 LINC00311Q8N616 119 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 SGCDQ92629 289 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 RBM14Q96PK6 669 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 MGLLQ99685 303 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 SLC25A33Q9BSK2 321 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 TMEM59Q9BXS4 323 aa14.22□□□□□ -0.13
SHKBP1-204ENST00000594862 SERTAD4Q9NUC0 356 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms