RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 RAB40BQ12829 278 aa17.84■□□□□ 0.45
SSBP4-203ENST00000593641 EBI3Q14213 229 aa17.84■□□□□ 0.45
SSBP4-203ENST00000593641 ZNF529Q6P280 563 aa17.84■□□□□ 0.45
SSBP4-203ENST00000593641 IZUMO1Q8IYV9 350 aa17.84■□□□□ 0.45
SSBP4-203ENST00000593641 OR2T10Q8NGZ9 312 aa17.84■□□□□ 0.45
SSBP4-203ENST00000593641 EAF1Q96JC9 268 aaPredicted RBP17.84■□□□□ 0.45
SSBP4-203ENST00000593641 DUX3Q96PT4 197 aa17.84■□□□□ 0.45
SSBP4-203ENST00000593641 S100A13Q99584 98 aa17.84■□□□□ 0.45
SSBP4-203ENST00000593641 METTL9Q9H1A3 318 aa17.84■□□□□ 0.45
SSBP4-203ENST00000593641 AMBNQ9NP70 447 aa17.84■□□□□ 0.45
SSBP4-203ENST00000593641 LIN7CQ9NUP9 197 aaKnown RBP17.84■□□□□ 0.45
SSBP4-203ENST00000593641 CCL24O00175 119 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 RAMP3O60896 148 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 IL3RAP26951 378 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 GPR12P47775 334 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 PNLIPRP3Q17RR3 467 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 CXorf66Q5JRM2 361 aaPredicted RBP17.83■□□□□ 0.44
SSBP4-203ENST00000593641 ASCL4Q6XD76 172 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 CBR4Q8N4T8 237 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 GPR148Q8TDV2 347 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 TFAP2CQ92754 450 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 RAX2Q96IS3 184 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 ABCG5Q9H222 651 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 IFT22Q9H7X7 185 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 ING4Q9UNL4 249 aa17.83■□□□□ 0.44
SSBP4-203ENST00000593641 SDCBPO00560 298 aaPredicted RBP17.82■□□□□ 0.44
SSBP4-203ENST00000593641 DYNC1I1O14576 645 aa17.82■□□□□ 0.44
SSBP4-203ENST00000593641 CDRT1O95170 752 aa17.82■□□□□ 0.44
SSBP4-203ENST00000593641 RBM11P57052 281 aaKnown RBP17.82■□□□□ 0.44
SSBP4-203ENST00000593641 PPP3R1P63098 170 aa17.82■□□□□ 0.44
SSBP4-203ENST00000593641 NHLRC3Q5JS37 347 aa17.82■□□□□ 0.44
SSBP4-203ENST00000593641 LINC00596Q86U02 117 aa17.82■□□□□ 0.44
SSBP4-203ENST00000593641 OR52M1Q8NGK5 317 aa17.82■□□□□ 0.44
SSBP4-203ENST00000593641 OR8U1Q8NH10 309 aa17.82■□□□□ 0.44
SSBP4-203ENST00000593641 OR52N1Q8NH53 320 aa17.82■□□□□ 0.44
SSBP4-203ENST00000593641 ARL11Q969Q4 196 aa17.82■□□□□ 0.44
SSBP4-203ENST00000593641 PAK1IP1Q9NWT1 392 aaPredicted RBP17.82■□□□□ 0.44
SSBP4-203ENST00000593641 IL36GQ9NZH8 169 aa17.82■□□□□ 0.44
SSBP4-203ENST00000593641 LINC01548A6NM66 108 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 RRP9O43818 475 aaKnown RBP17.81■□□□□ 0.44
SSBP4-203ENST00000593641 RPLP1P05386 114 aaKnown RBP17.81■□□□□ 0.44
SSBP4-203ENST00000593641 SERPINA2P20848 420 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 ZNF93P35789 620 aaPredicted RBP17.81■□□□□ 0.44
SSBP4-203ENST00000593641 GTF2A1P52655 376 aaPredicted RBP17.81■□□□□ 0.44
SSBP4-203ENST00000593641 GPR50Q13585 617 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 DDI2Q5TDH0 399 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 LINC00311Q8N616 119 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 OR52I1Q8NGK6 324 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 OR5M8Q8NGP6 311 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 NEK7Q8TDX7 302 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 RGP1Q92546 391 aaPredicted RBP17.81■□□□□ 0.44
SSBP4-203ENST00000593641 TMEM106AQ96A25 262 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 DCLRE1BQ9H816 532 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 TMEM138Q9NPI0 162 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 ZNF581Q9P0T4 197 aa17.81■□□□□ 0.44
SSBP4-203ENST00000593641 RPL36Q9Y3U8 105 aaKnown RBP17.81■□□□□ 0.44
SSBP4-203ENST00000593641 GEMIN2O14893 280 aaKnown RBP17.8■□□□□ 0.44
SSBP4-203ENST00000593641 MPV17LQ2QL34 196 aa17.8■□□□□ 0.44
SSBP4-203ENST00000593641 ATAD3CQ5T2N8 411 aa17.8■□□□□ 0.44
SSBP4-203ENST00000593641 Q8N6K4 173 aa17.8■□□□□ 0.44
SSBP4-203ENST00000593641 C8orf31Q8N9H6 132 aa17.8■□□□□ 0.44
SSBP4-203ENST00000593641 Q8N9W7 124 aa17.8■□□□□ 0.44
SSBP4-203ENST00000593641 RHOXF1Q8NHV9 184 aa17.8■□□□□ 0.44
SSBP4-203ENST00000593641 RTN4IP1Q8WWV3 396 aaPredicted RBP17.8■□□□□ 0.44
SSBP4-203ENST00000593641 RASL11BQ9BPW5 248 aa17.8■□□□□ 0.44
SSBP4-203ENST00000593641 GFOD1Q9NXC2 390 aa17.8■□□□□ 0.44
SSBP4-203ENST00000593641 C15orf65H3BRN8 121 aa17.79■□□□□ 0.44
SSBP4-203ENST00000593641 ZNF780AO75290 641 aaPredicted RBP17.79■□□□□ 0.44
SSBP4-203ENST00000593641 MOSP00540 346 aa17.79■□□□□ 0.44
SSBP4-203ENST00000593641 NHLRC4P0CG21 123 aaPredicted RBP17.79■□□□□ 0.44
SSBP4-203ENST00000593641 FOXE3Q13461 319 aa17.79■□□□□ 0.44
SSBP4-203ENST00000593641 DEFB136Q30KP8 78 aa17.79■□□□□ 0.44
SSBP4-203ENST00000593641 KLHL22Q53GT1 634 aa17.79■□□□□ 0.44
SSBP4-203ENST00000593641 C9orf66Q5T8R8 295 aa17.79■□□□□ 0.44
SSBP4-203ENST00000593641 ZFP1Q6P2D0 407 aa17.79■□□□□ 0.44
SSBP4-203ENST00000593641 RPL22L1Q6P5R6 122 aaKnown RBP17.79■□□□□ 0.44
SSBP4-203ENST00000593641 UBALD1Q8TB05 177 aa17.79■□□□□ 0.44
SSBP4-203ENST00000593641 CCDC107Q8WV48 283 aa17.79■□□□□ 0.44
SSBP4-203ENST00000593641 SORL1Q92673 2214 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 IGHV3-43A0A0B4J1X8 118 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 H3BNX3 289 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 TXNL1O43396 289 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 ORC5O43913 435 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 ELANEP08246 267 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 IGHV3-43DP0DP04 118 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 VDAC1P21796 283 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 CD1BP29016 333 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 BDKRB2P30411 391 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 CDX1P47902 265 aaPredicted RBP17.78■□□□□ 0.44
SSBP4-203ENST00000593641 LUMP51884 338 aaPredicted RBP17.78■□□□□ 0.44
SSBP4-203ENST00000593641 KIR2DS1Q14954 304 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 CCDC58Q4VC31 144 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 LCNL1Q6ZST4 164 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 STX19Q8N4C7 294 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 TMEM104Q8NE00 496 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 OR8H1Q8NGG4 311 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 MRPS18AQ9NVS2 196 aaKnown RBP17.78■□□□□ 0.44
SSBP4-203ENST00000593641 FAM53CQ9NYF3 392 aa17.78■□□□□ 0.44
SSBP4-203ENST00000593641 AIPO00170 330 aa17.77■□□□□ 0.44
SSBP4-203ENST00000593641 LIMS3P0CW19 117 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms