RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 OR7C1O76099 320 aaPredicted RBP18.84■□□□□ 0.61
LSM4-202ENST00000593564 CDRT1O95170 752 aa18.84■□□□□ 0.61
LSM4-202ENST00000593564 GAPDHP04406 335 aaKnown RBP18.84■□□□□ 0.61
LSM4-202ENST00000593564 CD2P06729 351 aa18.84■□□□□ 0.61
LSM4-202ENST00000593564 GTF2A1P52655 376 aaPredicted RBP18.84■□□□□ 0.61
LSM4-202ENST00000593564 RBM11P57052 281 aaKnown RBP18.84■□□□□ 0.61
LSM4-202ENST00000593564 MOB3BQ86TA1 216 aa18.84■□□□□ 0.61
LSM4-202ENST00000593564 TGIF2LXQ8IUE1 241 aa18.84■□□□□ 0.61
LSM4-202ENST00000593564 OR52M1Q8NGK5 317 aa18.84■□□□□ 0.61
LSM4-202ENST00000593564 EAF1Q96JC9 268 aaPredicted RBP18.84■□□□□ 0.61
LSM4-202ENST00000593564 METTL9Q9H1A3 318 aa18.84■□□□□ 0.61
LSM4-202ENST00000593564 ZMAT5Q9UDW3 170 aaKnown RBP18.84■□□□□ 0.61
LSM4-202ENST00000593564 RPL36Q9Y3U8 105 aaKnown RBP18.84■□□□□ 0.61
LSM4-202ENST00000593564 TMEM30CPA0ZSE6 113 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 C15orf65H3BRN8 121 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 AP4M1O00189 453 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 LIMS3P0CW19 117 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 LIMS4P0CW20 117 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 CCDC58Q4VC31 144 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 KLHL22Q53GT1 634 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 TEX38Q6PEX7 206 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 UNQ9370/PRO34162Q6UXP9 181 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 LINC00596Q86U02 117 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 LINC00311Q8N616 119 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 Q8N6K4 173 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 C8orf31Q8N9H6 132 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 OR52N1Q8NH53 320 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 TMEM106AQ96A25 262 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 TMEM138Q9NPI0 162 aa18.83■□□□□ 0.6
LSM4-202ENST00000593564 IGHV3-72A0A0B4J1Y9 119 aa18.82■□□□□ 0.6
LSM4-202ENST00000593564 LINC01548A6NM66 108 aa18.82■□□□□ 0.6
LSM4-202ENST00000593564 GPR12P47775 334 aa18.82■□□□□ 0.6
LSM4-202ENST00000593564 REG1BP48304 166 aa18.82■□□□□ 0.6
LSM4-202ENST00000593564 RPL22L1Q6P5R6 122 aaKnown RBP18.82■□□□□ 0.6
LSM4-202ENST00000593564 OR2T10Q8NGZ9 312 aa18.82■□□□□ 0.6
LSM4-202ENST00000593564 ABCG5Q9H222 651 aa18.82■□□□□ 0.6
LSM4-202ENST00000593564 LIN7CQ9NUP9 197 aaKnown RBP18.82■□□□□ 0.6
LSM4-202ENST00000593564 ING4Q9UNL4 249 aa18.82■□□□□ 0.6
LSM4-202ENST00000593564 NCBP2LA6PVI3 153 aaKnown RBP18.81■□□□□ 0.6
LSM4-202ENST00000593564 GEMIN2O14893 280 aaKnown RBP18.81■□□□□ 0.6
LSM4-202ENST00000593564 CSTBP04080 98 aaKnown RBP18.81■□□□□ 0.6
LSM4-202ENST00000593564 ZNF93P35789 620 aaPredicted RBP18.81■□□□□ 0.6
LSM4-202ENST00000593564 PPP3R1P63098 170 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 MPV17LQ2QL34 196 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 DDI2Q5TDH0 399 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 XAF1Q6GPH4 301 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 Q8N9W7 124 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 APH1BQ8WW43 257 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 ARL11Q969Q4 196 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 RAX2Q96IS3 184 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 WWC2-AS2Q96NR7 200 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 C9orf16Q9BUW7 83 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 GON7Q9BXV9 100 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 PAK1IP1Q9NWT1 392 aaPredicted RBP18.81■□□□□ 0.6
LSM4-202ENST00000593564 GFOD1Q9NXC2 390 aa18.81■□□□□ 0.6
LSM4-202ENST00000593564 LOC100130705A0A1B0GUX0 176 aa18.8■□□□□ 0.6
LSM4-202ENST00000593564 CCL24O00175 119 aa18.8■□□□□ 0.6
LSM4-202ENST00000593564 SDCBPO00560 298 aaPredicted RBP18.8■□□□□ 0.6
LSM4-202ENST00000593564 GP2P55259 537 aaKnown RBP18.8■□□□□ 0.6
LSM4-202ENST00000593564 DGCR2P98153 550 aa18.8■□□□□ 0.6
LSM4-202ENST00000593564 PNLIPRP3Q17RR3 467 aa18.8■□□□□ 0.6
LSM4-202ENST00000593564 TMEM104Q8NE00 496 aa18.8■□□□□ 0.6
LSM4-202ENST00000593564 RTN4IP1Q8WWV3 396 aaPredicted RBP18.8■□□□□ 0.6
LSM4-202ENST00000593564 ST6GALNAC6Q969X2 333 aa18.8■□□□□ 0.6
LSM4-202ENST00000593564 DUX3Q96PT4 197 aa18.8■□□□□ 0.6
LSM4-202ENST00000593564 S100A13Q99584 98 aa18.8■□□□□ 0.6
LSM4-202ENST00000593564 FGF20Q9NP95 211 aaPredicted RBP18.8■□□□□ 0.6
LSM4-202ENST00000593564 ORC5O43913 435 aa18.79■□□□□ 0.6
LSM4-202ENST00000593564 ZNF780AO75290 641 aaPredicted RBP18.79■□□□□ 0.6
LSM4-202ENST00000593564 SERPINA2P20848 420 aa18.79■□□□□ 0.6
LSM4-202ENST00000593564 IL3RAP26951 378 aa18.79■□□□□ 0.6
LSM4-202ENST00000593564 BDKRB2P30411 391 aa18.79■□□□□ 0.6
LSM4-202ENST00000593564 Q3ZCU0 254 aa18.79■□□□□ 0.6
LSM4-202ENST00000593564 SLC29A1Q99808 456 aa18.79■□□□□ 0.6
LSM4-202ENST00000593564 DCLRE1BQ9H816 532 aa18.79■□□□□ 0.6
LSM4-202ENST00000593564 PLSCR3Q9NRY6 295 aa18.79■□□□□ 0.6
LSM4-202ENST00000593564 RPLP1P05386 114 aaKnown RBP18.78■□□□□ 0.6
LSM4-202ENST00000593564 CD1BP29016 333 aa18.78■□□□□ 0.6
LSM4-202ENST00000593564 FOXE3Q13461 319 aa18.78■□□□□ 0.6
LSM4-202ENST00000593564 CXorf66Q5JRM2 361 aaPredicted RBP18.78■□□□□ 0.6
LSM4-202ENST00000593564 ATAD3CQ5T2N8 411 aa18.78■□□□□ 0.6
LSM4-202ENST00000593564 ZNF497Q6ZNH5 498 aa18.78■□□□□ 0.6
LSM4-202ENST00000593564 RNF152Q8N8N0 203 aa18.78■□□□□ 0.6
LSM4-202ENST00000593564 UBALD1Q8TB05 177 aa18.78■□□□□ 0.6
LSM4-202ENST00000593564 CCDC107Q8WV48 283 aa18.78■□□□□ 0.6
LSM4-202ENST00000593564 RAMP3O60896 148 aa18.77■□□□□ 0.6
LSM4-202ENST00000593564 MOSP00540 346 aa18.77■□□□□ 0.6
LSM4-202ENST00000593564 MT-ND4P03905 459 aa18.77■□□□□ 0.6
LSM4-202ENST00000593564 RAB25P57735 213 aa18.77■□□□□ 0.6
LSM4-202ENST00000593564 GPR50Q13585 617 aa18.77■□□□□ 0.6
LSM4-202ENST00000593564 FAM53AQ6NSI3 398 aaPredicted RBP18.77■□□□□ 0.6
LSM4-202ENST00000593564 TMPRSS11AQ6ZMR5 421 aa18.77■□□□□ 0.6
LSM4-202ENST00000593564 OR8H1Q8NGG4 311 aa18.77■□□□□ 0.6
LSM4-202ENST00000593564 OR8U1Q8NH10 309 aa18.77■□□□□ 0.6
LSM4-202ENST00000593564 NEK7Q8TDX7 302 aa18.77■□□□□ 0.6
LSM4-202ENST00000593564 S1PR3Q99500 378 aa18.77■□□□□ 0.6
LSM4-202ENST00000593564 SIRT4Q9Y6E7 314 aaPredicted RBP18.77■□□□□ 0.6
LSM4-202ENST00000593564 IGHV3-43A0A0B4J1X8 118 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 A0A1W2PP11 408 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 AIPO00170 330 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms