RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 TNFRSF19Q9NS68 423 aa3.65□□□□□ -1.83
SMAD4-216ENST00000593223 MLXQ9UH92 298 aa3.65□□□□□ -1.83
SMAD4-216ENST00000593223 KLF12Q9Y4X4 402 aa3.65□□□□□ -1.83
SMAD4-216ENST00000593223 LSM5Q9Y4Y9 91 aaKnown RBP3.65□□□□□ -1.83
SMAD4-216ENST00000593223 PCNX2A6NKB5 2137 aa3.65□□□□□ -1.83
SMAD4-216ENST00000593223 SIPA1L1O43166 1804 aa3.65□□□□□ -1.83
SMAD4-216ENST00000593223 TSC2P49815 1807 aa3.65□□□□□ -1.83
SMAD4-216ENST00000593223 ANKHD1Q8IWZ3 2542 aaKnown RBP3.65□□□□□ -1.83
SMAD4-216ENST00000593223 SCN10AQ9Y5Y9 1956 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 ISPDA4D126 451 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 FAM166BA8MTA8 275 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 LINC00587B1AMM8 73 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 C11orf98E9PRG8 122 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 M0R1B8 84 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 RAD51CO43502 376 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 FKBP6O75344 327 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 EIF3GO75821 320 aaKnown RBP eCLIP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 SULT1C4O75897 302 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 SOX14O95416 240 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 IFNA1P01562 189 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 SNRPCP09234 159 aaKnown RBP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 FAM228BP0C875 321 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 OGNP20774 298 aaKnown RBP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 HIST1H1TP22492 207 aaPredicted RBP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 RPL12P30050 165 aaKnown RBP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 SLC6A1P30531 599 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 GLP1RP43220 463 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 DLX1P56177 255 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 TCTAP57738 103 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 OR12D2P58182 307 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 RAB2AP61019 212 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 RPS14P62263 151 aaKnown RBP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 IL5RAQ01344 420 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 RPL18AQ02543 176 aaKnown RBP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 SKP2Q13309 424 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 CYP51A1Q16850 503 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 HLA-DRB5Q30154 266 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 RNF212Q495C1 297 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 TPTE2P1Q5T6R2 138 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 TNFAIP8L2Q6P589 184 aaPredicted RBP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 WDR74Q6RFH5 385 aaPredicted RBP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 C4orf22Q6V702 233 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 TMEM150AQ86TG1 271 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 C10orf107Q8IVU9 208 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 FBXO16Q8IX29 292 aaPredicted RBP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 ZADH2Q8N4Q0 377 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 OR2M7Q8NG81 312 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 OR4F15Q8NGB8 312 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 OR10G3Q8NGC4 313 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 OR10K1Q8NGX5 313 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 SKA2Q8WVK7 121 aaPredicted RBP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 DNAJA3Q96EY1 480 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 MRAP2Q96G30 205 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 MAGEB18Q96M61 343 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 ZNF285Q96NJ3 590 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 PFDN5Q99471 154 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 RASL11BQ9BPW5 248 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 FAM173AQ9BQD7 235 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 MIXL1Q9H2W2 232 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 REEP1Q9H902 201 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 TMEM9BQ9NQ34 198 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 EHFQ9NZC4 300 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 CES1P1Q9UKY3 287 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 OR51B2Q9Y5P1 312 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 ALG5Q9Y673 324 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 KIAA1671Q9BY89 1806 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 FN1P02751 2386 aaKnown RBP3.64□□□□□ -1.83
SMAD4-216ENST00000593223 CROCCQ5TZA2 2017 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 AKAP9Q99996 3911 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 ICE1Q9Y2F5 2266 aa3.64□□□□□ -1.83
SMAD4-216ENST00000593223 DENND4AQ7Z401 1863 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 A0A0G2JMP0 313 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 CENPVL3A0A0U1RRI6 287 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 DAPL1A0PJW8 107 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 KLLNB2CW77 178 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ZNF878C9JN71 531 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ATP6V1G2-DDX39BF2Z307 99 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 SMKR1H3BMG3 65 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 HPRT1P00492 218 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ARG1P05089 322 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 MRPL3P09001 348 aaKnown RBP3.63□□□□□ -1.83
SMAD4-216ENST00000593223 HOXC4P09017 264 aaPredicted RBP3.63□□□□□ -1.83
SMAD4-216ENST00000593223 OR10J4P0C629 311 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 PVRP15151 417 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 GABRR1P24046 479 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ERP29P30040 261 aaKnown RBP3.63□□□□□ -1.83
SMAD4-216ENST00000593223 PYCR1P32322 319 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 CA5AP35218 305 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 PTGDSP41222 190 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 RAB38P57729 211 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 TAS2R41P59536 307 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 RAP1BP61224 184 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 PPP1CBP62140 327 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ARG2P78540 354 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ECH1Q13011 328 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 OR1Q1Q15612 314 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 PRSS8Q16651 343 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 FHL5Q5TD97 284 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 CRYBG3Q68DQ2 2970 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms