RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 SPERTQ8NA61 448 aa16.66■□□□□ 0.26
CLIP3-206ENST00000593074 ABHD17AQ96GS6 310 aa16.66■□□□□ 0.26
CLIP3-206ENST00000593074 KIRREL1Q96J84 757 aa16.66■□□□□ 0.26
CLIP3-206ENST00000593074 BCL2L14Q9BZR8 327 aa16.66■□□□□ 0.26
CLIP3-206ENST00000593074 FAM215AQ9Y5M1 114 aa16.66■□□□□ 0.26
CLIP3-206ENST00000593074 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.66■□□□□ 0.26
CLIP3-206ENST00000593074 ST8SIA3O43173 380 aa16.66■□□□□ 0.26
CLIP3-206ENST00000593074 FAM180AQ6UWF9 173 aa16.66■□□□□ 0.26
CLIP3-206ENST00000593074 FAM169BQ8N8A8 192 aa16.66■□□□□ 0.26
CLIP3-206ENST00000593074 GALNT11Q8NCW6 608 aa16.66■□□□□ 0.26
CLIP3-206ENST00000593074 MARC2Q969Z3 335 aa16.66■□□□□ 0.26
CLIP3-206ENST00000593074 POMT1Q9Y6A1 747 aa16.66■□□□□ 0.26
CLIP3-206ENST00000593074 IGHV1-18A0A0C4DH31 117 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 RAB19A4D1S5 217 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 OR5H1A6NKK0 313 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 C1QTNF9BB2RNN3 333 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 B8ZZF3 427 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 HSD17B6O14756 317 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 SH2D1BO14796 132 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 GRPP07492 148 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 C1QTNF12Q5T7M4 302 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 EIF5AL1Q6IS14 154 aaKnown RBP16.65■□□□□ 0.26
CLIP3-206ENST00000593074 UQCC3Q6UW78 93 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 ZNF695Q8IW36 515 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 SPACA3Q8IXA5 215 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 SELENOHQ8IZQ5 122 aaKnown RBP16.65■□□□□ 0.26
CLIP3-206ENST00000593074 STPG2Q8N412 459 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 LILRB1Q8NHL6 650 aaPredicted RBP16.65■□□□□ 0.26
CLIP3-206ENST00000593074 TLNRD1Q9H1K6 362 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 LPAR3Q9UBY5 353 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 ARID1AO14497 2285 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 IGHV2OR16-5A0A0B4J2B6 119 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 H0Y980 276 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 JTBO76095 146 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 TIMP3P35625 211 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 P2RY1P47900 373 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 GPR157Q5UAW9 335 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 CXXC4Q9H2H0 198 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 ZDHHC8Q9ULC8 765 aa16.65■□□□□ 0.26
CLIP3-206ENST00000593074 AKAP13Q12802 2813 aa16.64■□□□□ 0.26
CLIP3-206ENST00000593074 INTS1Q8N201 2190 aaKnown RBP16.64■□□□□ 0.26
CLIP3-206ENST00000593074 NKX2-6A6NCS4 301 aa16.64■□□□□ 0.25
CLIP3-206ENST00000593074 MBNL2Q5VZF2 373 aaKnown RBP16.64■□□□□ 0.25
CLIP3-206ENST00000593074 C1orf174Q8IYL3 243 aa16.64■□□□□ 0.25
CLIP3-206ENST00000593074 DMBX1Q8NFW5 382 aa16.64■□□□□ 0.25
CLIP3-206ENST00000593074 OR5D13Q8NGL4 314 aa16.64■□□□□ 0.25
CLIP3-206ENST00000593074 IL22RA2Q969J5 263 aa16.64■□□□□ 0.25
CLIP3-206ENST00000593074 ERGIC1Q969X5 290 aa16.64■□□□□ 0.25
CLIP3-206ENST00000593074 GPHA2Q96T91 129 aa16.64■□□□□ 0.25
CLIP3-206ENST00000593074 SPIN2AQ99865 258 aa16.64■□□□□ 0.25
CLIP3-206ENST00000593074 SPIN2BQ9BPZ2 258 aa16.64■□□□□ 0.25
CLIP3-206ENST00000593074 MBNL3Q9NUK0 354 aaKnown RBP16.64■□□□□ 0.25
CLIP3-206ENST00000593074 RCL1Q9Y2P8 373 aaKnown RBP16.64■□□□□ 0.25
CLIP3-206ENST00000593074 WIPI2Q9Y4P8 454 aa16.64■□□□□ 0.25
CLIP3-206ENST00000593074 IGHV3-64DA0A0J9YX35 117 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 A0A1B0GWJ7 208 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 CLEC18AA5D8T8 446 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 GPR137BO60478 399 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 PGLYRP1O75594 196 aaPredicted RBP16.63■□□□□ 0.25
CLIP3-206ENST00000593074 HOXD4P09016 255 aaPredicted RBP16.63■□□□□ 0.25
CLIP3-206ENST00000593074 WNT2P09544 360 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 NMSQ5H8A3 153 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 FIP1L1Q6UN15 594 aaKnown RBP16.63■□□□□ 0.25
CLIP3-206ENST00000593074 C11orf53Q8IXP5 236 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 RPRMLQ8N4K4 120 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 UBAC2Q8NBM4 344 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 CLEC18CQ8NCF0 446 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 FAM57AQ8TBR7 257 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 SAT2Q96F10 170 aaPredicted RBP16.63■□□□□ 0.25
CLIP3-206ENST00000593074 OR1A1Q9P1Q5 309 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 SLC25A15Q9Y619 301 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 NUDT19A8MXV4 375 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.63■□□□□ 0.25
CLIP3-206ENST00000593074 TIMM8AO60220 97 aaPredicted RBP16.63■□□□□ 0.25
CLIP3-206ENST00000593074 HAND1O96004 215 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 ZNF718Q3SXZ3 478 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 Q6ZR03 302 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 SMIM8Q96KF7 97 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 C11orf1Q9H5F2 150 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 TAAR3PQ9P1P4 343 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 WASF3Q9UPY6 502 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 TP53TG5Q9Y2B4 290 aa16.63■□□□□ 0.25
CLIP3-206ENST00000593074 GTF3C1Q12789 2109 aa16.62■□□□□ 0.25
CLIP3-206ENST00000593074 F2RP25116 425 aa16.62■□□□□ 0.25
CLIP3-206ENST00000593074 S100GP29377 79 aa16.62■□□□□ 0.25
CLIP3-206ENST00000593074 HMGN3Q15651 99 aa16.62■□□□□ 0.25
CLIP3-206ENST00000593074 BPIFCQ8NFQ6 507 aa16.62■□□□□ 0.25
CLIP3-206ENST00000593074 OR10V1Q8NGI7 309 aa16.62■□□□□ 0.25
CLIP3-206ENST00000593074 IL1F10Q8WWZ1 152 aa16.62■□□□□ 0.25
CLIP3-206ENST00000593074 ARL11Q969Q4 196 aa16.62■□□□□ 0.25
CLIP3-206ENST00000593074 ABHD14BQ96IU4 210 aa16.62■□□□□ 0.25
CLIP3-206ENST00000593074 ARV1Q9H2C2 271 aa16.62■□□□□ 0.25
CLIP3-206ENST00000593074 ERRFI1Q9UJM3 462 aaPredicted RBP16.62■□□□□ 0.25
CLIP3-206ENST00000593074 TRAPPC2LQ9UL33 140 aa16.62■□□□□ 0.25
CLIP3-206ENST00000593074 ZNF705EA8MWA4 302 aaPredicted RBP16.61■□□□□ 0.25
CLIP3-206ENST00000593074 VDAC1P21796 283 aa16.61■□□□□ 0.25
CLIP3-206ENST00000593074 LMO1P25800 156 aa16.61■□□□□ 0.25
CLIP3-206ENST00000593074 TESK1Q15569 626 aa16.61■□□□□ 0.25
CLIP3-206ENST00000593074 MST1LQ2TV78 715 aa16.61■□□□□ 0.25
CLIP3-206ENST00000593074 ZNF474Q6S9Z5 364 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms