RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, human

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-218	ENST00000593053	LINC00596	Q86U02	117 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	STX19	Q8N4C7	294 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	JAGN1	Q8N5M9	183 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	BPIFB6	Q8NFQ5	453 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	OR4F17	Q8NGA8	305 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	OR10A7	Q8NGE5	316 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	OR56B4	Q8NH76	319 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	NEK7	Q8TDX7	302 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	MUL1	Q969V5	352 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	OR4F4	Q96R69	305 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	PSORS1C1	Q9UIG5	152 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	TG	P01266	2768 aa		10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053	PRKDC	P78527	4128 aa	Known RBP	10.44	□□□□□ -0.74
PRKCSH-218	ENST00000593053		A0A1W2PPE3	182 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053		A0A1W2PPI3	338 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053		M0QZK8	103 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	MYL12B	O14950	172 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	SNRNP70	P08621	437 aa	Known RBP	10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	CEL	P19835	753 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	GZMH	P20718	246 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	HSPA13	P48723	471 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	WNT4	P56705	351 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	DOC2B	Q14184	412 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	DIAPH2-AS1	Q14236	149 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	C9orf152	Q5JTZ5	239 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	GLIPR1L1	Q6UWM5	242 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	SLC16A12	Q6ZSM3	486 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	DRAM1	Q8N682	238 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	OR10X1	Q8NGY0	326 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	UBALD1	Q8TB05	177 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	CCDC107	Q8WV48	283 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	CNBD2	Q96M20	576 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	ANKRD60	Q9BZ19	345 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	VCX	Q9H320	206 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	MOB4	Q9Y3A3	225 aa		10.43	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FAM90A18P	A6NE21	464 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FAM90A16P	A6NEW6	464 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FAM90A20P	A6NIJ5	464 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FAM90A9P	A6NNJ1	464 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FAM90A12P	A8MX19	464 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FAM90A5P	A8MXJ8	464 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	C15orf65	H3BRN8	121 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	MT-ND4	P03905	459 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	MAS1	P04201	325 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FAM90A15P	P0C7V4	464 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FAM90A13P	P0C7W8	464 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FAM90A14P	P0C7W9	464 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FAM90A24P	P0C7X0	464 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	MYF6	P23409	242 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	RAB7A	P51149	207 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	CD83	Q01151	205 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	GPR176	Q14439	515 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	HES1	Q14469	280 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	TCTEX1D4	Q5JR98	221 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	THNSL2	Q86YJ6	484 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FBLIM1	Q8WUP2	373 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	ARL11	Q969Q4	196 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	DERL3	Q96Q80	235 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	SPACA1	Q9HBV2	294 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	PLCXD1	Q9NUJ7	323 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	KIAA2026	Q5HYC2	2103 aa		10.42	□□□□□ -0.74
PRKCSH-218	ENST00000593053	TCRBV4S1A1T	A0A5B7	111 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	MCRIP1	C9JLW8	97 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	AIP	O00170	330 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	SDCBP	O00560	298 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	HSD17B6	O14756	317 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	PIN1P1	O15428	100 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	PRB2	P02812	416 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	TMEM11	P17152	192 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	REG1B	P48304	166 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	HNF4G	Q14541	408 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	OXLD1	Q5BKU9	147 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	KPRP	Q5T749	579 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	AWAT2	Q6E213	333 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	C10orf99	Q6UWK7	81 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	ZNF497	Q6ZNH5	498 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	OR8H3	Q8N146	312 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	NANOGP1	Q8N7R0	232 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	MYDGF	Q969H8	173 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	BANF2	Q9H503	90 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	RCC2	Q9P258	522 aa	Known RBP	10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	ERGIC3	Q9Y282	383 aa		10.41	□□□□□ -0.74
PRKCSH-218	ENST00000593053	IGHV3-43	A0A0B4J1X8	118 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	CCRL2	O00421	344 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	ORC5	O43913	435 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	CRTAP	O75718	401 aa	Predicted RBP	10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	IGKV1D-33	P01593	117 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	IGKV1-33	P01594	117 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	CD1A	P06126	327 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	IGHV3-43D	P0DP04	118 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	PF4V1	P10720	104 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	INSL4	Q14641	139 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	KHDC1L	Q5JSQ8	128 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	RAB12	Q6IQ22	244 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	MOB3B	Q86TA1	216 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	LYPD6	Q86Y78	171 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	CDH26	Q8IXH8	852 aa		10.4	□□□□□ -0.74
PRKCSH-218	ENST00000593053	TMEM104	Q8NE00	496 aa		10.4	□□□□□ -0.74

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