RNA–Protein interactions for RNA: ENST00000592883.5

RFX2-223, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-223	ENST00000592883	GTF2A1	P52655	376 aa	Predicted RBP	12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	PNLIPRP3	Q17RR3	467 aa		12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	ASCL4	Q6XD76	172 aa		12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	TGIF2LX	Q8IUE1	241 aa		12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	IZUMO1	Q8IYV9	350 aa		12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	RGP1	Q92546	391 aa	Predicted RBP	12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	CPNE2	Q96FN4	548 aa	Predicted RBP	12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	PRR25	Q96S07	402 aa		12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	ABCG5	Q9H222	651 aa		12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	LIN7C	Q9NUP9	197 aa	Known RBP	12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	ERVK13-1	Q9NX77	482 aa		12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	ZMAT5	Q9UDW3	170 aa	Known RBP	12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	ST3GAL6	Q9Y274	331 aa		12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	LSM4	Q9Y4Z0	139 aa	Known RBP	12.1	□□□□□ -0.47
RFX2-223	ENST00000592883	IGHV3-43	A0A0B4J1X8	118 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	C15orf65	H3BRN8	121 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	MPZL2	O60487	215 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	RAMP3	O60896	148 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	OR7C1	O76099	320 aa	Predicted RBP	12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	RPSA	P08865	295 aa	Known RBP	12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	IGHV3-43D	P0DP04	118 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	ALDH3A2	P51648	485 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	GPR50	Q13585	617 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	CXorf66	Q5JRM2	361 aa	Predicted RBP	12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	NKAPL	Q5M9Q1	402 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	OR2T10	Q8NGZ9	312 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	CCDC107	Q8WV48	283 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	MYCBP	Q99417	103 aa	Predicted RBP	12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	JAM3	Q9BX67	310 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	PLSCR3	Q9NRY6	295 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	ING4	Q9UNL4	249 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	GMPPB	Q9Y5P6	360 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883		U3KQK5	164 aa		12.09	□□□□□ -0.47
RFX2-223	ENST00000592883	TMEM30CP	A0ZSE6	113 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	ZNF736	B4DX44	427 aa	Predicted RBP	12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	SDCBP	O00560	298 aa	Predicted RBP	12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	GEMIN2	O14893	280 aa	Known RBP	12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	CIB2	O75838	187 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	FADS2	O95864	444 aa	Known RBP	12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	NHLRC4	P0CG21	123 aa	Predicted RBP	12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	GZMH	P20718	246 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	GBX2	P52951	348 aa	Predicted RBP	12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	GP2	P55259	537 aa	Known RBP	12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	RBM11	P57052	281 aa	Known RBP	12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	MRPL28	Q13084	256 aa	Known RBP	12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	KIR2DS1	Q14954	304 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	LINC00311	Q8N616	119 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	TMEM104	Q8NE00	496 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	OR5M8	Q8NGP6	311 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	OR8U1	Q8NH10	309 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	ARL11	Q969Q4	196 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	ST6GALNAC6	Q969X2	333 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	HSPB9	Q9BQS6	159 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	METTL9	Q9H1A3	318 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	IFT22	Q9H7X7	185 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	GFOD1	Q9NXC2	390 aa		12.08	□□□□□ -0.48
RFX2-223	ENST00000592883	SLC31A2	O15432	143 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	SERPINA2	P20848	420 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	ECI1	P42126	302 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	CDX1	P47902	265 aa	Predicted RBP	12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	FOXE3	Q13461	319 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	NHLRC3	Q5JS37	347 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	ATAD3C	Q5T2N8	411 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	C9orf66	Q5T8R8	295 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	XAF1	Q6GPH4	301 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	RNF152	Q8N8N0	203 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	OR52M1	Q8NGK5	317 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	OR52I1	Q8NGK6	324 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	OR52N1	Q8NH53	320 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	ORAI1	Q96D31	301 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	S1PR3	Q99500	378 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	ASCL2	Q99929	193 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	GON7	Q9BXV9	100 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883	IL36G	Q9NZH8	169 aa		12.07	□□□□□ -0.48
RFX2-223	ENST00000592883		A0A1W2PP11	408 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	SEC14L6	B5MCN3	397 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883		H3BNX3	289 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	ATP5H	O75947	161 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	MOS	P00540	346 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	CSTB	P04080	98 aa	Known RBP	12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	ELANE	P08246	267 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	IL3RA	P26951	378 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	CD1B	P29016	333 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	F2RL1	P55085	397 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	CFHR3	Q02985	330 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	RAB40B	Q12829	278 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	DDI2	Q5TDH0	399 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	CBR4	Q8N4T8	237 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	C8orf31	Q8N9H6	132 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	RHOXF1	Q8NHV9	184 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	GPR148	Q8TDV2	347 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	NEK7	Q8TDX7	302 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	TMEM106A	Q96A25	262 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	RASL11B	Q9BPW5	248 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	SCOC	Q9UIL1	159 aa		12.06	□□□□□ -0.48
RFX2-223	ENST00000592883	RRP9	O43818	475 aa	Known RBP	12.05	□□□□□ -0.48
RFX2-223	ENST00000592883	ORC5	O43913	435 aa		12.05	□□□□□ -0.48
RFX2-223	ENST00000592883	LIMS3	P0CW19	117 aa		12.05	□□□□□ -0.48
RFX2-223	ENST00000592883	LIMS4	P0CW20	117 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms