RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 GABRPO00591 440 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 OR2F2O95006 317 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 MAS1P04201 325 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 AMY1AP04745 511 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 AMY2AP04746 511 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 FAM90A15PP0C7V4 464 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 FAM90A13PP0C7W8 464 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 FAM90A14PP0C7W9 464 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 FAM90A24PP0C7X0 464 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 BDKRB2P30411 391 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 CEACAM3P40198 252 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 OR3A4PP47883 348 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 ARHGDIBP52566 201 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 PRRX1P54821 245 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 ZP1P60852 638 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 AESQ08117 197 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 TMEM95Q3KNT9 176 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 DDI2Q5TDH0 399 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 FOXB2Q5VYV0 432 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 RNLSQ5VYX0 342 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 TRAPPC6BQ86SZ2 158 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 UFD1Q92890 307 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 TMEM203Q969S6 136 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 COQ2Q96H96 371 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 LINC00574Q9H8X3 128 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 ING3Q9NXR8 418 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 BLOC1S6Q9UL45 172 aa8.29□□□□□ -1.08
VPS4B-207ENST00000591519 TSSC4Q9Y5U2 329 aaPredicted RBP8.29□□□□□ -1.08
VPS4B-207ENST00000591519 TRBV5-7A0A0A0MS05 114 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 ZNF729A6NN14 1252 aaPredicted RBP8.28□□□□□ -1.08
VPS4B-207ENST00000591519 M0QZK8 103 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 SLC33A1O00400 549 aaPredicted RBP8.28□□□□□ -1.08
VPS4B-207ENST00000591519 CDRT1O95170 752 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 CD24P25063 80 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 GDNFP39905 211 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 RSU1Q15404 277 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 C17orf58Q2M2W7 97 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 HLA-DRB5Q30154 266 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 TPTE2P1Q5T6R2 138 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 FAM27D1Q5T7N8 215 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 PRAMEF5Q5TYX0 476 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 ELP2Q6IA86 826 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 CCDC144NLQ6NUI1 221 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 ZNF529Q6P280 563 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 PRSS48Q7RTY5 328 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 THNSL2Q86YJ6 484 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 JAGN1Q8N5M9 183 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 DERL3Q96Q80 235 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 SLC25A33Q9BSK2 321 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 ZNF286AQ9HBT8 521 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 TMEM138Q9NPI0 162 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 OR6C3Q9NZP0 311 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 CKLFQ9UBR5 152 aa8.28□□□□□ -1.08
VPS4B-207ENST00000591519 KBTBD11-OT1A0A1B0GTJ5 212 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 TCRBV4S1A1TA0A5B7 111 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 TOR1AO14656 332 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 DEGS1O15121 323 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 DENRO43583 198 aaKnown RBP8.27□□□□□ -1.09
VPS4B-207ENST00000591519 HTR3BO95264 441 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 DUS4LO95620 317 aaKnown RBP8.27□□□□□ -1.09
VPS4B-207ENST00000591519 LPLP06858 475 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 FAM106CPP0CH98 169 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 ZNF44P15621 663 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 IGLL1P15814 213 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 IGFBP3P17936 291 aaPredicted RBP8.27□□□□□ -1.09
VPS4B-207ENST00000591519 ZNF93P35789 620 aaPredicted RBP8.27□□□□□ -1.09
VPS4B-207ENST00000591519 PTGFRP43088 359 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 MTNR1BP49286 362 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 RPS25P62851 125 aaKnown RBP8.27□□□□□ -1.09
VPS4B-207ENST00000591519 PAX5Q02548 391 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 ABCA11PQ4W5N1 156 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 ACSM3Q53FZ2 586 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 KRBOX4Q5JUW0 171 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 CEACAM19Q7Z692 300 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 ZNF565Q8N9K5 539 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 Q8NFD4 153 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 PXT1Q8NFP0 134 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 OR4D6Q8NGJ1 314 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 OR51T1Q8NGJ9 327 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 OR9G1Q8NH87 305 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 CAPSLQ8WWF8 208 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 MUL1Q969V5 352 aa8.27□□□□□ -1.09
VPS4B-207ENST00000591519 CPNE2Q96FN4 548 aaPredicted RBP8.27□□□□□ -1.09
VPS4B-207ENST00000591519 RCC1LQ96I51 464 aaKnown RBP8.27□□□□□ -1.09
VPS4B-207ENST00000591519 A0A1W2PRX2 142 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 NPIPB11E5RHQ5 1161 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 HSPB6O14558 160 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 RRP9O43818 475 aaKnown RBP8.26□□□□□ -1.09
VPS4B-207ENST00000591519 PF4V1P10720 104 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 SERPINA2P20848 420 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 MNDAP41218 407 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 SLC22A6Q4U2R8 563 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 UTF1Q5T230 341 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 ASCL4Q6XD76 172 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 SLC16A12Q6ZSM3 486 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 OR4X2Q8NGF9 303 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 KIRREL1Q96J84 757 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 S100A13Q99584 98 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 MGLLQ99685 303 aa8.26□□□□□ -1.09
VPS4B-207ENST00000591519 PCDHB16Q9NRJ7 776 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms