RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 OR4K15Q8NH41 348 aa9.9□□□□□ -0.82
APOC1-206ENST00000590334 HDHD3Q9BSH5 251 aaPredicted RBP9.9□□□□□ -0.82
APOC1-206ENST00000590334 TMEM160Q9NX00 188 aa9.9□□□□□ -0.82
APOC1-206ENST00000590334 ING3Q9NXR8 418 aa9.9□□□□□ -0.82
APOC1-206ENST00000590334 ONECUT1Q9UBC0 465 aa9.9□□□□□ -0.82
APOC1-206ENST00000590334 RABL2AQ9UBK7 228 aaPredicted RBP9.9□□□□□ -0.82
APOC1-206ENST00000590334 EXTL2Q9UBQ6 330 aa9.9□□□□□ -0.82
APOC1-206ENST00000590334 TRAPPC2LQ9UL33 140 aa9.9□□□□□ -0.82
APOC1-206ENST00000590334 KCNS2Q9ULS6 477 aa9.9□□□□□ -0.82
APOC1-206ENST00000590334 MGAT4AQ9UM21 535 aa9.9□□□□□ -0.82
APOC1-206ENST00000590334 RABL2BQ9UNT1 228 aa9.9□□□□□ -0.82
APOC1-206ENST00000590334 SVEP1Q4LDE5 3571 aa9.9□□□□□ -0.83
APOC1-206ENST00000590334 MED13LQ71F56 2210 aa9.9□□□□□ -0.83
APOC1-206ENST00000590334 hCG_1809904A0A1W2PP81 198 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 A0A1W2PPE2 198 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 A0A1W2PR64 198 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 A0A1W2PRV1 198 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 C15orf65H3BRN8 121 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 SSX5O60225 188 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 TOX4O94842 621 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 FCGR3AP08637 254 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 TALDO1P37837 337 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 GLP1RP43220 463 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 MRPS15P82914 257 aaKnown RBP9.89□□□□□ -0.83
APOC1-206ENST00000590334 ARFRP1Q13795 201 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 METTL11BQ5VVY1 283 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 FAHD2BQ6P2I3 314 aaPredicted RBP9.89□□□□□ -0.83
APOC1-206ENST00000590334 CLEC9AQ6UXN8 241 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 HEPN1Q6WQI6 88 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 LINC00299Q6ZSB3 139 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 IZUMO1Q8IYV9 350 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 DTX3Q8N9I9 347 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 OR10A7Q8NGE5 316 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 OR6Q1Q8NGQ2 317 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 MRGPRDQ8TDS7 321 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 C15orf40Q8WUR7 153 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 CCDC107Q8WV48 283 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 UPRTQ96BW1 309 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 FAHD2AQ96GK7 314 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 SOSTQ9BQB4 213 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 OCSTAMPQ9BR26 566 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 C7orf69Q9H7B7 122 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 METTL8Q9H825 291 aaKnown RBP9.89□□□□□ -0.83
APOC1-206ENST00000590334 CHMP1AQ9HD42 196 aaPredicted RBP9.89□□□□□ -0.83
APOC1-206ENST00000590334 Q9N2K0 584 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 CALYQ9NYX4 217 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 PTTG2Q9NZH5 202 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 AUP1Q9Y679 476 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 ABCA1O95477 2261 aa9.89□□□□□ -0.83
APOC1-206ENST00000590334 TRAV39A0A0B4J263 110 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 MEX3AA1L020 520 aaKnown RBP9.88□□□□□ -0.83
APOC1-206ENST00000590334 A8MV72 311 aaPredicted RBP9.88□□□□□ -0.83
APOC1-206ENST00000590334 C12orf77C9JDV5 145 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 F2RL2O00254 374 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 AVPP01185 164 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 IGHV1-8P0DP01 117 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 PRTN3P24158 256 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 S100A5P33763 92 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 SSTR5P35346 364 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 GNG2P59768 71 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 HMGN3Q15651 99 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 TMEM30BQ3MIR4 351 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 C1orf229Q6ZS94 237 aaPredicted RBP9.88□□□□□ -0.83
APOC1-206ENST00000590334 VMO1Q7Z5L0 202 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 CCDC190Q86UF4 302 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 NUDCD2Q8WVJ2 157 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 TNFRSF14Q92956 283 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 DIRAS2Q96HU8 199 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 ABHD1Q96SE0 405 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 TBX15Q96SF7 602 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 SCPEP1Q9HB40 452 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 RAB9BQ9NP90 201 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 ACANP16112 2415 aa9.88□□□□□ -0.83
APOC1-206ENST00000590334 A0A087X0M5 115 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 A0A1B0GX30 115 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 SULT1C2O00338 296 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 CTDSPLO15194 276 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 MMP23AO75900 390 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 FSHBP01225 129 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 PTHLHP12272 177 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 PTBP1P26599 531 aaKnown RBP eCLIP9.87□□□□□ -0.83
APOC1-206ENST00000590334 PRSS3P35030 304 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 ETV6P41212 452 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 CBX5P45973 191 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 ERVFRD-1P60508 538 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 HLA-DRB3P79483 266 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 OR52W1Q6IF63 320 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 PYHIN1Q6K0P9 492 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 OR52M1Q8NGK5 317 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 GPX8Q8TED1 209 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 ARL11Q969Q4 196 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 KIRREL1Q96J84 757 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 PCGF1Q9BSM1 259 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 TAF9BQ9HBM6 251 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 YAE1D1Q9NRH1 226 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 IDI2-AS1Q9NZ38 188 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 KCNIP1Q9NZI2 227 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 ANAPC10Q9UM13 185 aa9.87□□□□□ -0.83
APOC1-206ENST00000590334 MRPS7Q9Y2R9 242 aaKnown RBP9.87□□□□□ -0.83
APOC1-206ENST00000590334 SESN1Q9Y6P5 492 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms