RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 VSIG8P0DPA2 414 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 GTF2A1P52655 376 aaPredicted RBP15.23■□□□□ 0.03
TRAF4-216ENST00000586813 RBM11P57052 281 aaKnown RBP15.23■□□□□ 0.03
TRAF4-216ENST00000586813 NHLRC3Q5JS37 347 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 UNQ9370/PRO34162Q6UXP9 181 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 MOB3BQ86TA1 216 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 TGIF2LXQ8IUE1 241 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 Q8N6K4 173 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 OR52I1Q8NGK6 324 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 RHOXF1Q8NHV9 184 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 RAX2Q96IS3 184 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 Q96MT0 163 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 IL36GQ9NZH8 169 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 TMEM30CPA0ZSE6 113 aa15.22■□□□□ 0.03
TRAF4-216ENST00000586813 AP4M1O00189 453 aa15.22■□□□□ 0.03
TRAF4-216ENST00000586813 CD2P06729 351 aa15.22■□□□□ 0.03
TRAF4-216ENST00000586813 GZMHP20718 246 aa15.22■□□□□ 0.03
TRAF4-216ENST00000586813 GPR12P47775 334 aa15.22■□□□□ 0.03
TRAF4-216ENST00000586813 DGCR2P98153 550 aa15.22■□□□□ 0.03
TRAF4-216ENST00000586813 TEX38Q6PEX7 206 aa15.22■□□□□ 0.03
TRAF4-216ENST00000586813 GPR148Q8TDV2 347 aa15.22■□□□□ 0.03
TRAF4-216ENST00000586813 ABCG5Q9H222 651 aa15.22■□□□□ 0.03
TRAF4-216ENST00000586813 LIN7CQ9NUP9 197 aaKnown RBP15.22■□□□□ 0.03
TRAF4-216ENST00000586813 ZMAT5Q9UDW3 170 aaKnown RBP15.22■□□□□ 0.03
TRAF4-216ENST00000586813 NCBP2LA6PVI3 153 aaKnown RBP15.21■□□□□ 0.03
TRAF4-216ENST00000586813 C15orf65H3BRN8 121 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 CCL24O00175 119 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 SDCBPO00560 298 aaPredicted RBP15.21■□□□□ 0.03
TRAF4-216ENST00000586813 GEMIN2O14893 280 aaKnown RBP15.21■□□□□ 0.03
TRAF4-216ENST00000586813 RPLP1P05386 114 aaKnown RBP15.21■□□□□ 0.03
TRAF4-216ENST00000586813 RAB25P57735 213 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 LINC00596Q86U02 117 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 LINC00311Q8N616 119 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 C8orf31Q8N9H6 132 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 Q8N9W7 124 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 OR52M1Q8NGK5 317 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 OR2T10Q8NGZ9 312 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 OR52N1Q8NH53 320 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 TFAP2CQ92754 450 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 TMEM106AQ96A25 262 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 METTL9Q9H1A3 318 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 TMEM138Q9NPI0 162 aa15.21■□□□□ 0.03
TRAF4-216ENST00000586813 MRPS18AQ9NVS2 196 aaKnown RBP15.21■□□□□ 0.03
TRAF4-216ENST00000586813 CSTBP04080 98 aaKnown RBP15.2■□□□□ 0.02
TRAF4-216ENST00000586813 LIMS3P0CW19 117 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 LIMS4P0CW20 117 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 SERPINA2P20848 420 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 ZNF93P35789 620 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-216ENST00000586813 GP2P55259 537 aaKnown RBP15.2■□□□□ 0.02
TRAF4-216ENST00000586813 PPP3R1P63098 170 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 PNLIPRP3Q17RR3 467 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 MPV17LQ2QL34 196 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 DEFB136Q30KP8 78 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 KLHL22Q53GT1 634 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 DDI2Q5TDH0 399 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 XAF1Q6GPH4 301 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 ZFP1Q6P2D0 407 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 TMEM104Q8NE00 496 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 OR8U1Q8NH10 309 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 UBALD1Q8TB05 177 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 RTN4IP1Q8WWV3 396 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-216ENST00000586813 ARL11Q969Q4 196 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 ST6GALNAC6Q969X2 333 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 GON7Q9BXV9 100 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 DCLRE1BQ9H816 532 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 GFOD1Q9NXC2 390 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 ING4Q9UNL4 249 aa15.2■□□□□ 0.02
TRAF4-216ENST00000586813 RPL36Q9Y3U8 105 aaKnown RBP15.2■□□□□ 0.02
TRAF4-216ENST00000586813 RAMP3O60896 148 aa15.19■□□□□ 0.02
TRAF4-216ENST00000586813 IL3RAP26951 378 aa15.19■□□□□ 0.02
TRAF4-216ENST00000586813 CCDC58Q4VC31 144 aa15.19■□□□□ 0.02
TRAF4-216ENST00000586813 CXorf66Q5JRM2 361 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-216ENST00000586813 FAM53AQ6NSI3 398 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-216ENST00000586813 RPL22L1Q6P5R6 122 aaKnown RBP15.19■□□□□ 0.02
TRAF4-216ENST00000586813 LCNL1Q6ZST4 164 aa15.19■□□□□ 0.02
TRAF4-216ENST00000586813 CCDC107Q8WV48 283 aa15.19■□□□□ 0.02
TRAF4-216ENST00000586813 APH1BQ8WW43 257 aa15.19■□□□□ 0.02
TRAF4-216ENST00000586813 PAK1IP1Q9NWT1 392 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-216ENST00000586813 IGHV3-43A0A0B4J1X8 118 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 ORC5O43913 435 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 MOSP00540 346 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 IGHV3-43DP0DP04 118 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 CD1BP29016 333 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 BDKRB2P30411 391 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 LUMP51884 338 aaPredicted RBP15.18■□□□□ 0.02
TRAF4-216ENST00000586813 FOXE3Q13461 319 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 GPR50Q13585 617 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 ATAD3CQ5T2N8 411 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 RNF152Q8N8N0 203 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 NEK7Q8TDX7 302 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 S100A13Q99584 98 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 PLSCR3Q9NRY6 295 aa15.18■□□□□ 0.02
TRAF4-216ENST00000586813 LOC100130705A0A1B0GUX0 176 aa15.17■□□□□ 0.02
TRAF4-216ENST00000586813 A0A1W2PP11 408 aa15.17■□□□□ 0.02
TRAF4-216ENST00000586813 AIPO00170 330 aa15.17■□□□□ 0.02
TRAF4-216ENST00000586813 RRP9O43818 475 aaKnown RBP15.17■□□□□ 0.02
TRAF4-216ENST00000586813 CDX1P47902 265 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-216ENST00000586813 CFHR3Q02985 330 aa15.17■□□□□ 0.02
TRAF4-216ENST00000586813 KIR2DS1Q14954 304 aa15.17■□□□□ 0.02
TRAF4-216ENST00000586813 ZNF497Q6ZNH5 498 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms