RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 SERPINF1P36955 418 aa17.12■□□□□ 0.33
ATG4D-204ENST00000586417 MOB1BQ7L9L4 216 aa17.12■□□□□ 0.33
ATG4D-204ENST00000586417 CD177Q8N6Q3 437 aa17.12■□□□□ 0.33
ATG4D-204ENST00000586417 OR2T35Q8NGX2 323 aa17.12■□□□□ 0.33
ATG4D-204ENST00000586417 CASTOR1Q8WTX7 329 aa17.12■□□□□ 0.33
ATG4D-204ENST00000586417 SEBOXQ9HB31 216 aaPredicted RBP17.12■□□□□ 0.33
ATG4D-204ENST00000586417 MBNL3Q9NUK0 354 aaKnown RBP17.12■□□□□ 0.33
ATG4D-204ENST00000586417 C14orf166Q9Y224 244 aaKnown RBP17.12■□□□□ 0.33
ATG4D-204ENST00000586417 WIPI2Q9Y4P8 454 aa17.12■□□□□ 0.33
ATG4D-204ENST00000586417 CACNA1DQ01668 2161 aa17.12■□□□□ 0.33
ATG4D-204ENST00000586417 ARFGEF3Q5TH69 2177 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 FAM172BPA6NC97 362 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 C17orf100A8MU93 164 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 CD55P08174 381 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 CTXN2P0C2S0 81 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 ZNF728P0DKX0 622 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 PSG2P11465 335 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 TNFSF4P23510 183 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 APOBEC3AP31941 199 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-204ENST00000586417 OR3A1P47881 315 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 UCP3P55916 312 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 RAP2BP61225 183 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 COL10A1Q03692 680 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 Q5BKY6 102 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 HIST2H2BCQ6DN03 193 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 OR5T2Q8NGG2 359 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 OR4A4PQ8NGN8 299 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 TOMM40LQ969M1 308 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 HYLS1Q96M11 299 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 DIRC2Q96SL1 478 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 PHB2Q99623 299 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 CABLES2Q9BTV7 478 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 RANBP3Q9H6Z4 567 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-204ENST00000586417 OPN4Q9UHM6 478 aa17.11■□□□□ 0.33
ATG4D-204ENST00000586417 IGKV1D-17A0A075B6S4 117 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 TRAV39A0A0B4J263 110 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 DBX1A6NMT0 343 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 BET1O15155 118 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 TUSC2O75896 110 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 PPYP01298 95 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 HLA-GP17693 338 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 FXYD4P59646 89 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 SEC61A1P61619 476 aaKnown RBP17.1■□□□□ 0.33
ATG4D-204ENST00000586417 MST1LQ2TV78 715 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 LIN54Q6MZP7 749 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 ZNF295-AS1Q8N0V1 137 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 ZFAND1Q8TCF1 268 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 Q8TCH9 128 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 ERGIC1Q969X5 290 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 BOLA1Q9Y3E2 137 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 TK1P04183 234 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 PRDX2P32119 198 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 LAMTOR1Q6IAA8 161 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 BOLLQ8N9W6 283 aaKnown RBP17.1■□□□□ 0.33
ATG4D-204ENST00000586417 OR5M8Q8NGP6 311 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 COQ2Q96H96 371 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 SHARPINQ9H0F6 387 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 PLSCR3Q9NRY6 295 aa17.1■□□□□ 0.33
ATG4D-204ENST00000586417 RAI1Q7Z5J4 1906 aaPredicted RBP17.09■□□□□ 0.33
ATG4D-204ENST00000586417 ZNF737O75373 536 aa17.09■□□□□ 0.33
ATG4D-204ENST00000586417 DNASE1P24855 282 aa17.09■□□□□ 0.33
ATG4D-204ENST00000586417 KCNJ3P48549 501 aa17.09■□□□□ 0.33
ATG4D-204ENST00000586417 SLC35E4Q6ICL7 350 aa17.09■□□□□ 0.33
ATG4D-204ENST00000586417 C11orf88Q6PI97 169 aa17.09■□□□□ 0.33
ATG4D-204ENST00000586417 RNF7Q9UBF6 113 aa17.09■□□□□ 0.33
ATG4D-204ENST00000586417 TRAPPC2LQ9UL33 140 aa17.09■□□□□ 0.33
ATG4D-204ENST00000586417 MGAT4AQ9UM21 535 aa17.09■□□□□ 0.33
ATG4D-204ENST00000586417 PCDHB10Q9UN67 800 aa17.09■□□□□ 0.33
ATG4D-204ENST00000586417 IGHV3OR15-7A0A075B7D8 119 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 TRBV6-7A0A0A0MS04 114 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 A0A0B4J2A0 478 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 TMEM30CPA0ZSE6 113 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 CRYM-AS1A6NIL9 109 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 M0R233 179 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 HERV-K104P61576 105 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 SLC9A3R2Q15599 337 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 HMGN3Q15651 99 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 ANKRD55Q3KP44 614 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 ZCCHC24Q8N2G6 241 aaKnown RBP17.08■□□□□ 0.33
ATG4D-204ENST00000586417 MUC15Q8N387 334 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 RSRP1Q9BUV0 290 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 CLEC4MQ9H2X3 399 aaPredicted RBP17.08■□□□□ 0.33
ATG4D-204ENST00000586417 DNAJB11Q9UBS4 358 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 SHPKQ9UHJ6 478 aa17.08■□□□□ 0.33
ATG4D-204ENST00000586417 HECTD1Q9ULT8 2610 aa17.08■□□□□ 0.32
ATG4D-204ENST00000586417 NPIPB11E5RHQ5 1161 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 CD80P33681 288 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 CCL8P80075 99 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 PAX5Q02548 391 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 AESQ08117 197 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 SRSF4Q08170 494 aaKnown RBP17.07■□□□□ 0.32
ATG4D-204ENST00000586417 FAM201AQ5SY85 155 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 LPCAT3Q6P1A2 487 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 SLC38A6Q8IZM9 456 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 C9orf62Q8N4C0 152 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 ASB13Q8WXK3 278 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 KIRREL1Q96J84 757 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 UBTD1Q9HAC8 227 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 PRR13Q9NZ81 148 aa17.07■□□□□ 0.32
ATG4D-204ENST00000586417 KIF25Q9UIL4 384 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms