RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CNIH2Q6PI25 160 aa11.2□□□□□ -0.62
VMP1-203ENST00000586245 BAIAP2L2Q6UXY1 529 aa11.2□□□□□ -0.62
VMP1-203ENST00000586245 C1orf122Q6ZSJ8 110 aa11.2□□□□□ -0.62
VMP1-203ENST00000586245 C15orf40Q8WUR7 153 aa11.2□□□□□ -0.62
VMP1-203ENST00000586245 NUDCD2Q8WVJ2 157 aa11.2□□□□□ -0.62
VMP1-203ENST00000586245 PCGF1Q9BSM1 259 aa11.2□□□□□ -0.62
VMP1-203ENST00000586245 TMPRSS13Q9BYE2 586 aa11.2□□□□□ -0.62
VMP1-203ENST00000586245 METTL8Q9H825 291 aaKnown RBP11.2□□□□□ -0.62
VMP1-203ENST00000586245 MBNL3Q9NUK0 354 aaKnown RBP11.2□□□□□ -0.62
VMP1-203ENST00000586245 CALYQ9NYX4 217 aa11.2□□□□□ -0.62
VMP1-203ENST00000586245 OPN4Q9UHM6 478 aa11.2□□□□□ -0.62
VMP1-203ENST00000586245 ELF5Q9UKW6 265 aaPredicted RBP11.2□□□□□ -0.62
VMP1-203ENST00000586245 KBTBD11-OT1A0A1B0GTJ5 212 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 C17orf98A8MV24 154 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 SPINT2O43291 252 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 ORC5O43913 435 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 TPPPO94811 219 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 FCGR3AP08637 254 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 RCC1P18754 421 aaPredicted RBP11.19□□□□□ -0.62
VMP1-203ENST00000586245 DTYMKP23919 212 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 TNFSF8P32971 234 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 PRSS3P35030 304 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 ERVFRD-1P60508 538 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 MADCAM1Q13477 382 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 ZNF880Q6PDB4 577 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 VMO1Q7Z5L0 202 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 ZNF554Q86TJ5 538 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 SNX29P2Q8IUI4 249 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 PRR18Q8N4B5 295 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 ARL11Q969Q4 196 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 SIRPDQ9H106 197 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 RABL2AQ9UBK7 228 aaPredicted RBP11.19□□□□□ -0.62
VMP1-203ENST00000586245 RABL2BQ9UNT1 228 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 ARHGAP32A7KAX9 2087 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.19□□□□□ -0.621e-5■■■■□ 21.5
VMP1-203ENST00000586245 CELSR1Q9NYQ6 3014 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 MAST4O15021 2626 aa11.19□□□□□ -0.62
VMP1-203ENST00000586245 HLA-DQB1P01920 261 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 CGB3P0DN86 165 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 CGB7P0DN87 165 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 IGHV1-8P0DP01 117 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 MMP9P14780 707 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 HNF1AP20823 631 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 SSTR5P35346 364 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 CBX5P45973 191 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 DLX6P56179 175 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 IL18Q14116 193 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 C17orf58Q2M2W7 97 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 PRAMEF5Q5TYX0 476 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 HEPN1Q6WQI6 88 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 TEX29Q8N6K0 151 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 Q8N7P7 452 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 RFESDQ8TAC1 157 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 TAF9BQ9HBM6 251 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 Q9N2K0 584 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 SIRT7Q9NRC8 400 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 IDI2-AS1Q9NZ38 188 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 PTTG2Q9NZH5 202 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 ABCA1O95477 2261 aa11.18□□□□□ -0.62
VMP1-203ENST00000586245 ACANP16112 2415 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 FABP12A6NFH5 140 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 C12orf77C9JDV5 145 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 C15orf65H3BRN8 121 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 SSX5O60225 188 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 HBZP02008 142 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 PTHLHP12272 177 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 OMGP23515 440 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 PRTN3P24158 256 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 KIR2DS4P43632 304 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 HLA-DRB3P79483 266 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 KIR2DS1Q14954 304 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 HMGN3Q15651 99 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 SRSF7Q16629 238 aaKnown RBP eCLIP11.17□□□□□ -0.62
VMP1-203ENST00000586245 LTC4SQ16873 150 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 TMEM30BQ3MIR4 351 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 NCR3LG1Q68D85 454 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 OR52W1Q6IF63 320 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 PYHIN1Q6K0P9 492 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 FAM131AQ6UXB0 335 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 ZNF782Q6ZMW2 699 aaPredicted RBP11.17□□□□□ -0.62
VMP1-203ENST00000586245 C11orf42Q8N5U0 333 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 OR10A7Q8NGE5 316 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 OR6Q1Q8NGQ2 317 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 UBALD1Q8TB05 177 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 UPRTQ96BW1 309 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 GALMQ96C23 342 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 TBX15Q96SF7 602 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 ST6GALNAC5Q9BVH7 336 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 GSX1Q9H4S2 264 aaPredicted RBP11.17□□□□□ -0.62
VMP1-203ENST00000586245 HEXA-AS1Q9H8Q6 139 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 LINC00574Q9H8X3 128 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 UNKLQ9H9P5 680 aaKnown RBP11.17□□□□□ -0.62
VMP1-203ENST00000586245 SCPEP1Q9HB40 452 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 ZNF286AQ9HBT8 521 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 IFT46Q9NQC8 304 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 TMEM160Q9NX00 188 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 ZNF230Q9UIE0 474 aaPredicted RBP11.17□□□□□ -0.62
VMP1-203ENST00000586245 SESN1Q9Y6P5 492 aa11.17□□□□□ -0.62
VMP1-203ENST00000586245 TRDCB7Z8K6 153 aa11.16□□□□□ -0.62
VMP1-203ENST00000586245 NPIPB11E5RHQ5 1161 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms