RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ACSF3Q4G176 576 aaPredicted RBP10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 KRBOX4Q5JUW0 171 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 FAM201AQ5SY85 155 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 DMBX1Q8NFW5 382 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 OR52M1Q8NGK5 317 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 TAAR6Q96RI8 345 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 TMEM30CPA0ZSE6 113 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 LINC00862A6NCI5 91 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 AHRRA9YTQ3 701 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 HEXAP06865 529 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 NHLH2Q02577 135 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 GPR157Q5UAW9 335 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 LYPD6Q86Y78 171 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 S100PBPQ96BU1 408 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 TP53RKQ96S44 253 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 SCNM1Q9BWG6 230 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 CXXC4Q9H2H0 198 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 FBXO7Q9Y3I1 522 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 RNF222A6NCQ9 220 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 B3GALNT1O75752 331 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 KIR2DL2P43627 348 aaPredicted RBP10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 OR2D2Q9H210 308 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 ZDHHC11Q9H8X9 412 aa10.62□□□□□ -0.71
SMARCA4-208ENST00000585799 CRYM-AS1A6NIL9 109 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 PROB1E7EW31 1015 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 G3V3Q6 166 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 H7C1Q1 480 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 CST4P01036 141 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 CBR1P16152 277 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 PPP1CCP36873 323 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 KLF3P57682 345 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 HLA-DRB3P79483 266 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 CXorf66Q5JRM2 361 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 ZNF818PQ6ZRF7 136 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 OR2G3Q8NGZ4 309 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 OR1L1Q8NH94 360 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 MRGPRFQ96AM1 343 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 SLC25A31Q9H0C2 315 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 Q9N2K0 584 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 FAM212BQ9NTI7 297 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 CACNG5Q9UF02 275 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 CACNA1AO00555 2505 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 LRP5LA4QPB2 252 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 PSG2P11465 335 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 HOXD11P31277 338 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 TMEM267Q0VDI3 215 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 TMEM88Q6PEY1 159 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 PIP4P1Q86T03 277 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 MED12LQ86YW9 2145 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 Q8IYB0 196 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 ASB13Q8WXK3 278 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 LRRC46Q96FV0 321 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 IGKV1D-13A0A0B4J2D9 117 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 A0A1W2PPE3 182 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 KRBOX1C9JBD0 128 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 IGKV1-13P0DP09 117 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 CFPP27918 469 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 RAB2AP61019 212 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 RBPJQ06330 500 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 MZT1Q08AG7 82 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 CATR1Q13166 79 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 TMEM65Q6PI78 240 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 DNM1P46Q6ZS02 220 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 OR52L2PQ8NGH6 319 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 MOB3AQ96BX8 217 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 DCTN5Q9BTE1 182 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 LRFN3Q9BTN0 628 aa10.61□□□□□ -0.71
SMARCA4-208ENST00000585799 OR5H1A6NKK0 313 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 FAM90A27PA6NNH2 459 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 JTBO76095 146 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 MBPP02686 304 aaPredicted RBP10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 FAM87AP0C7U9 286 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 SLC25A4P12235 298 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 ALDH3B1P43353 468 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 CCL8P80075 99 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 TLE1Q04724 770 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 Q3ZCU0 254 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 NHLRC3Q5JS37 347 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 C20orf24Q9BUV8 137 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 TP53TG5Q9Y2B4 290 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 TMED3Q9Y3Q3 217 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 CDRT15L2A8MXV6 281 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 C1QL1O75973 258 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 CD8AP01732 235 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 ID4P47928 161 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 TUSC1Q2TAM9 212 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 NRN1LQ496H8 165 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 TMEM42Q69YG0 159 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 ATPIF1Q9UII2 106 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 OR2W1Q9Y3N9 320 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 DOCK11Q5JSL3 2073 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 RPS10-NUDT3A0A1W2PQS6 291 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 BPIFCQ8NFQ6 507 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 LIME1Q9H400 295 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 PLEKHA2Q9HB19 425 aa10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 MYOZ1Q9NP98 299 aaPredicted RBP10.6□□□□□ -0.71
SMARCA4-208ENST00000585799 K7EM74 188 aa10.59□□□□□ -0.71
SMARCA4-208ENST00000585799 AQP7O14520 342 aa10.59□□□□□ -0.71
SMARCA4-208ENST00000585799 LPAR6P43657 344 aa10.59□□□□□ -0.71
SMARCA4-208ENST00000585799 MECP2P51608 486 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms