RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 SERPINA7P05543 415 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF806P0C7X5 589 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 COX5BP10606 129 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CEACAM1P13688 526 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 EPHA1P21709 976 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 C9orf135Q5VTT2 229 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TMEM217Q8N7C4 229 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 NEK7Q8TDX7 302 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 GTF3AQ92664 365 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 APOBEC3DQ96AK3 386 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF251Q9BRH9 671 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PRRG4Q9BZD6 226 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNHIT1O43257 154 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 SS18L1O75177 396 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PGLYRP1O75594 196 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 F10P00742 488 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 OR8U8P0C7N1 319 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ITGA3P26006 1051 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PEAR1Q5VY43 1037 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PCSK4Q6UW60 755 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 HEPN1Q6WQI6 88 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PSMF1Q92530 271 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 RIMS4Q9H426 269 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TAAR3PQ9P1P4 343 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 BOKQ9UMX3 212 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 FREM1Q5H8C1 2179 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 H3BQ15 152 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 SRP19P09132 144 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PCP4P48539 62 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PAX9P55771 341 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 RUNX1Q01196 453 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 OR8G1Q15617 311 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 DCAF12Q5T6F0 453 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 SPINK14Q6IE38 97 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 OR5A2Q8NGI9 324 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF552Q9H707 407 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 LIPGQ9Y5X9 500 aa12.13□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PCSK5Q92824 1860 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF503-AS2A6NEH8 195 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 AP4M1O00189 453 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CER1O95813 267 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 F2RP25116 425 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 LHX2P50458 406 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF154Q13106 437 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 RNPS1Q15287 305 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 C20orf204Q6ZNR8 217 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 MRPL30Q8TCC3 161 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TCEAL3Q969E4 200 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 MUCL1Q96DR8 90 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ATP5SQ99766 215 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TMEM265A0A087WTH1 108 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 WRBO00258 174 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TNFSF12O43508 249 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 SYNGR1O43759 233 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 NXPH3O95157 252 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TDGF1P13385 188 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 NQO2P16083 231 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 FOXG1P55316 489 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 SRYQ05066 204 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 IL24Q13007 206 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 HAGHQ16775 308 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 AKR1C8PQ5T2L2 129 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 LINC00596Q86U02 117 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TUSC5Q8IXB3 177 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CT55Q8WUE5 264 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PLK3Q9H4B4 646 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 LRFN1Q9P244 771 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CBY1Q9Y3M2 126 aa12.12□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TRBV6-6A0A0A6YYG2 114 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 SCAF4O95104 1147 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 NGFP01138 241 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 IFNA17P01571 189 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CLDN18P56856 261 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TLE4Q04727 773 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ICAM4Q14773 271 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF506Q5JVG8 444 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 DPPA3Q6W0C5 159 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TIPARPQ7Z3E1 657 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 RAB39BQ96DA2 213 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 RBMXL1Q96E39 390 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 DOCK10Q96BY6 2186 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 A0A087WWC5 75 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 SLC33A1O00400 549 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TAS2R30P59541 319 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF324BQ6AW86 544 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 C6orf15Q6UXA7 325 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TCTEX1D2Q8WW35 142 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 HIST1H2AAQ96QV6 131 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF703Q9H7S9 590 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CALHM2Q9HA72 323 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 OR2W1Q9Y3N9 320 aa12.11□□□□□ -0.47
CDK5RAP3-237ENST00000585163 A0A0G2JRQ6 117 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CD300LBA8K4G0 201 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 FABP1P07148 127 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 SLC25A6P12236 298 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 S100GP29377 79 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CLDND2Q8NHS1 167 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 OR5P3Q8WZ94 311 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 POM121L2Q96KW2 1035 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms