RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 C5orf67F2Z3F1 127 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 MFNGO00587 321 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF264O43296 627 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 LATO43561 262 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 ALOX12BO75342 701 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 CDK2AP2O75956 126 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 CYB5AP00167 134 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 IGHMP01871 453 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 BGLAPP02818 100 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 CLPSP04118 112 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 S100A8P05109 93 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 CRYBA1P05813 215 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 CD2P06729 351 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 ERCC1P07992 297 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 FCGR3AP08637 254 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 ADCYAP1P18509 176 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 PVALBP20472 110 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 BCL3P20749 454 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 PTNP21246 168 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 HSD11B1P28845 292 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 PTGFRP43088 359 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC6A8P48029 635 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 CSNK1EP49674 416 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 MEOX2P50222 304 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 CAV2P51636 162 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 PRKXP51817 358 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 ATP1B3P54709 279 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 TAS2R31P59538 309 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 RPL27P61353 136 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 SKP1P63208 163 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 EIF5AP63241 154 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 RPL18Q07020 188 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 SKP2Q13309 424 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 EIF3IQ13347 325 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 PEA15Q15121 130 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 HMGN3Q15651 99 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 TOMM34Q15785 309 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 FAM189A2Q15884 450 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 ANKRD55Q3KP44 614 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 CDNFQ49AH0 187 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 TMEM128Q5BJH2 165 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 FAM78AQ5JUQ0 283 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 VAX1Q5SQQ9 334 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 GLYATL3Q5SZD4 288 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 AVPI1Q5T686 147 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF776Q68DI1 518 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 RTL6Q6ICC9 239 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 PRSS54Q6PEW0 395 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 HAGHLQ6PII5 290 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 NPSR1Q6W5P4 371 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 IL17RELQ6ZVW7 336 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 DPY19L4Q7Z388 723 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 YRDCQ86U90 279 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 KRTAP11-1Q8IUC1 163 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF561Q8N587 486 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 C15orf54Q8N8G6 183 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 LRTM2Q8N967 370 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 BHLHE23Q8NDY6 225 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 OR4A4PQ8NGN8 299 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 OR10AC1Q8NH08 325 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 OR8S1Q8NH09 359 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 TERB2Q8NHR7 220 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 SFT2D1Q8WV19 159 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 OR1E3Q8WZA6 343 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 FAM3CQ92520 227 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 ELSPBP1Q96BH3 223 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 MRPL53Q96EL3 112 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 SEC22AQ96IW7 307 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 SCGB3A2Q96PL1 93 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 AQP10Q96PS8 301 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 TSPAN32Q96QS1 320 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 AMELYQ99218 206 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 C12orf57Q99622 126 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 UQCC2Q9BRT2 126 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 PDCD10Q9BUL8 212 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 NUDT9Q9BW91 350 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF471Q9BX82 626 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 GPR174Q9BXC1 333 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 TTTY10Q9BZA0 68 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC7A5P2Q9GIP4 190 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 CST11Q9H112 138 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 C5orf66Q9H5L9 145 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 RAB18Q9NP72 206 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 ZDHHC4Q9NPG8 344 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 PLEK2Q9NYT0 353 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 PRODH2Q9UF12 536 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 IKZF2Q9UKS7 526 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 HHLA2Q9UM44 414 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 VSIG4Q9Y279 399 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 TIMM10BQ9Y5J6 103 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 KIAA0100Q14667 2235 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 PRSS37A4D1T9 235 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 OR2AT4A6NND4 320 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 TMEM14DPA8MWL7 114 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 RNASEK-C17orf49H0YIS7 233 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 K7EQS6 105 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 GPR31O00270 319 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 NPIPB7O75200 414 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 CA11O75493 328 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms