RNA–Protein interactions for RNA: ENST00000583340.1

SUPT6H-208, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-208ENST00000583340 PRRT1Q99946 306 aa7.09□□□□□ -1.27
SUPT6H-208ENST00000583340 PCGF1Q9BSM1 259 aa7.09□□□□□ -1.27
SUPT6H-208ENST00000583340 FGF23Q9GZV9 251 aaPredicted RBP7.09□□□□□ -1.27
SUPT6H-208ENST00000583340 FAM234AQ9H0X4 552 aa7.09□□□□□ -1.27
SUPT6H-208ENST00000583340 LPAR5Q9H1C0 372 aa7.09□□□□□ -1.27
SUPT6H-208ENST00000583340 WDR13Q9H1Z4 485 aa7.09□□□□□ -1.27
SUPT6H-208ENST00000583340 OR51J1Q9H342 316 aa7.09□□□□□ -1.27
SUPT6H-208ENST00000583340 ONECUT1Q9UBC0 465 aa7.09□□□□□ -1.27
SUPT6H-208ENST00000583340 RPUSD1Q9UJJ7 312 aaKnown RBP7.09□□□□□ -1.27
SUPT6H-208ENST00000583340 ING4Q9UNL4 249 aa7.09□□□□□ -1.27
SUPT6H-208ENST00000583340 TRAV40A0A0B4J280 105 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 UBE2QL1A1L167 161 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 TMEM235A6NFC5 223 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 RFPL4AA6NLU0 287 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 SERPINE3A8MV23 424 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 RFPL4AL1F8VTS6 287 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 M0R1W7 72 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 ARPC1BO15143 372 aaKnown RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 SYNGR1O43759 233 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 RAB3DO95716 219 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 PLATP00750 562 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 AVPP01185 164 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 FSHBP01225 129 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 CSTBP04080 98 aaKnown RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 CD74P04233 296 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 IL5P05113 134 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 HIST1H1DP16402 221 aaKnown RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 MGMTP16455 207 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 PRDX2P32119 198 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 RBMXP38159 391 aaKnown RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 MECP2P51608 486 aaKnown RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 HILS1P60008 231 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 RSU1Q15404 277 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 CDNFQ49AH0 187 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 SLC22A6Q4U2R8 563 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 RNASE10Q5GAN6 216 aaKnown RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 NCR3LG1Q68D85 454 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 OR10K2Q6IF99 312 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 C1orf229Q6ZS94 237 aaPredicted RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 C9orf139Q6ZV77 190 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 SLC25A26Q70HW3 274 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 SAXO1Q8IYX7 474 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 PXT1Q8NFP0 134 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 OR51T1Q8NGJ9 327 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 OR5D13Q8NGL4 314 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 SPATA3Q8NHX4 192 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 C8orf46Q8TAG6 207 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 EMG1Q92979 244 aaKnown RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 MRPS24Q96EL2 167 aaKnown RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 ST6GAL2Q96JF0 529 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 C1orf147Q96MC9 270 aaPredicted RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 GAFA1Q96PS6 74 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 SPACA5Q96QH8 159 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 NKX3-1Q99801 234 aaPredicted RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 SLC6A7Q99884 636 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 SLC25A21Q9BQT8 299 aaPredicted RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 GINS4Q9BRT9 223 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 DCTN5Q9BTE1 182 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 TM2D1Q9BX74 207 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 ELL3Q9HB65 397 aaPredicted RBP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 HES4Q9HCC6 221 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 IL36GQ9NZH8 169 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 OR14J1Q9UGF5 321 aa7.08□□□□□ -1.28
SUPT6H-208ENST00000583340 SVEP1Q4LDE5 3571 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 STAB1Q9NY15 2570 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 IGKV1D-17A0A075B6S4 117 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 SNRPGP15A8MWD9 76 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 H3BUI4 141 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 SSNA1O43805 119 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 CREBL2O60519 120 aaPredicted RBP7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 AMY2AP04746 511 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 TMEM225BP0DP42 221 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 PTHLHP12272 177 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 ANXA3P12429 323 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 SERPINA2P20848 420 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 ERP29P30040 261 aaKnown RBP7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 ZP1P60852 638 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 ARF6P62330 175 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 RPL31P62899 125 aaKnown RBP7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 MRPS15P82914 257 aaKnown RBP7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 HOXA4Q00056 320 aaPredicted RBP7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 CD83Q01151 205 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 PDZK1IP1Q13113 114 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 CBX3Q13185 183 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 ARFRP1Q13795 201 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 MOGAT2Q3SYC2 334 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 DMRTC1Q5HYR2 192 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 SPIN3Q5JUX0 258 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 C1orf122Q6ZSJ8 110 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 CALHM1Q8IU99 346 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 FAM185AQ8N0U4 392 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 FAM58AQ8N1B3 248 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 FAM89BQ8N5H3 189 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 ASCC1Q8N9N2 400 aaKnown RBP7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 ZBTB8BQ8NAP8 495 aaPredicted RBP7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 ZDHHC16Q969W1 377 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 SLAMF9Q96A28 289 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 SELENOIQ9C0D9 397 aa7.07□□□□□ -1.28
SUPT6H-208ENST00000583340 GHITMQ9H3K2 345 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms