RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 OR13D1Q8NGV5 346 aa16.4■□□□□ 0.22
TOP3A-213ENST00000582230 MRPL30Q8TCC3 161 aaKnown RBP16.4■□□□□ 0.22
TOP3A-213ENST00000582230 CMTM3Q96MX0 182 aa16.4■□□□□ 0.22
TOP3A-213ENST00000582230 MS4A7Q9GZW8 240 aaPredicted RBP16.4■□□□□ 0.22
TOP3A-213ENST00000582230 DIABLOQ9NR28 239 aa16.4■□□□□ 0.22
TOP3A-213ENST00000582230 MBNL3Q9NUK0 354 aaKnown RBP16.4■□□□□ 0.22
TOP3A-213ENST00000582230 AK3Q9UIJ7 227 aa16.4■□□□□ 0.22
TOP3A-213ENST00000582230 IGHV3OR16-10A0A075B7F0 116 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 TRBV6-6A0A0A6YYG2 114 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 TRAV39A0A0B4J263 110 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 NPIPB11E5RHQ5 1161 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 ZNF701M0R085 212 aaPredicted RBP16.39■□□□□ 0.21
TOP3A-213ENST00000582230 MFNGO00587 321 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 NAPSAO96009 420 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 MRPS15P82914 257 aaKnown RBP16.39■□□□□ 0.21
TOP3A-213ENST00000582230 ZNF782Q6ZMW2 699 aaPredicted RBP16.39■□□□□ 0.21
TOP3A-213ENST00000582230 C9orf139Q6ZV77 190 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 SAMD12Q8N8I0 201 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 S100A16Q96FQ6 103 aaKnown RBP16.39■□□□□ 0.21
TOP3A-213ENST00000582230 CMSS1Q9BQ75 279 aaKnown RBP16.39■□□□□ 0.21
TOP3A-213ENST00000582230 RBM38Q9H0Z9 239 aaKnown RBP16.39■□□□□ 0.21
TOP3A-213ENST00000582230 CHMP1AQ9HD42 196 aaPredicted RBP16.39■□□□□ 0.21
TOP3A-213ENST00000582230 C12orf4Q9NQ89 552 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.39■□□□□ 0.21
TOP3A-213ENST00000582230 KCNIP1Q9NZI2 227 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 COMMD3Q9UBI1 195 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 RSL24D1Q9UHA3 163 aaKnown RBP16.39■□□□□ 0.21
TOP3A-213ENST00000582230 KCNK7Q9Y2U2 307 aa16.39■□□□□ 0.21
TOP3A-213ENST00000582230 SMIM31A0A1B0GVY4 71 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 SPINT2O43291 252 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 CD3GP09693 182 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 GNB3P16520 340 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 DLX1P56177 255 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 CDNFQ49AH0 187 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 PRAMEF5Q5TYX0 476 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 HCP5Q6MZN7 132 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 MOB1BQ7L9L4 216 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 RTN4RL2Q86UN3 420 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 DYNC2LI1Q8TCX1 351 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 ARL11Q969Q4 196 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 CYYR1Q96J86 154 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 TMEM133Q9H2Q1 129 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 IDI2-AS1Q9NZ38 188 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 NDUFA13Q9P0J0 144 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 ZNF69Q9UC07 566 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 MGAT4AQ9UM21 535 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 WNK2Q9Y3S1 2297 aa16.38■□□□□ 0.21
TOP3A-213ENST00000582230 A0A075B6Q4 140 aa16.37■□□□□ 0.21
TOP3A-213ENST00000582230 C15orf65H3BRN8 121 aa16.37■□□□□ 0.21
TOP3A-213ENST00000582230 MMP23AO75900 390 aa16.37■□□□□ 0.21
TOP3A-213ENST00000582230 GSTP1P09211 210 aaKnown RBP16.37■□□□□ 0.21
TOP3A-213ENST00000582230 RCC1P18754 421 aaPredicted RBP16.37■□□□□ 0.21
TOP3A-213ENST00000582230 OMGP23515 440 aa16.37■□□□□ 0.21
TOP3A-213ENST00000582230 SSTR5P35346 364 aa16.37■□□□□ 0.21
TOP3A-213ENST00000582230 KLRD1Q13241 179 aa16.37■□□□□ 0.21
TOP3A-213ENST00000582230 TMEM30BQ3MIR4 351 aa16.37■□□□□ 0.21
TOP3A-213ENST00000582230 PDZD9Q8IXQ8 264 aa16.37■□□□□ 0.21
TOP3A-213ENST00000582230 PNKDQ8N490 385 aa16.37■□□□□ 0.21
TOP3A-213ENST00000582230 CCDC59Q9P031 241 aaKnown RBP16.37■□□□□ 0.21
TOP3A-213ENST00000582230 MTORP42345 2549 aa16.37■□□□□ 0.21
TOP3A-213ENST00000582230 FN1P02751 2386 aaKnown RBP16.36■□□□□ 0.21
TOP3A-213ENST00000582230 A0A087X0M5 115 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 A0A1B0GX30 115 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 C12orf77C9JDV5 145 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 NPFFO15130 113 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 COX7A1P24310 79 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 PRB3Q04118 309 aaPredicted RBP16.36■□□□□ 0.21
TOP3A-213ENST00000582230 ARFRP1Q13795 201 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 MIDNQ504T8 468 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 OLFML2AQ68BL7 652 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 ZNF880Q6PDB4 577 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 BRD3OSQ6XYD6 125 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 OR11H6Q8NGC7 330 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 OR52M1Q8NGK5 317 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 RFESDQ8TAC1 157 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 KIRREL1Q96J84 757 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 SUCNR1Q9BXA5 334 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 ZMAT3Q9HA38 289 aaKnown RBP16.36■□□□□ 0.21
TOP3A-213ENST00000582230 TAF9BQ9HBM6 251 aa16.36■□□□□ 0.21
TOP3A-213ENST00000582230 NSD1Q96L73 2696 aaPredicted RBP16.35■□□□□ 0.21
TOP3A-213ENST00000582230 SONP18583 2426 aaKnown RBP16.35■□□□□ 0.21
TOP3A-213ENST00000582230 TRAV18A0A075B6X5 111 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 IGHV2-26A0A0B4J1V2 119 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 XRCC3O43542 346 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 IFNA2P01563 188 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 APOA1P02647 267 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 CD34P28906 385 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 GDNFP39905 211 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 PITPNAQ00169 270 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 PNLIPRP3Q17RR3 467 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 ZNF260Q3ZCT1 412 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 HACD4Q5VWC8 232 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 RUSC1-AS1Q66K80 236 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 ABHD12Q8N2K0 398 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 HDHD3Q9BSH5 251 aaPredicted RBP16.35■□□□□ 0.21
TOP3A-213ENST00000582230 CLEC7AQ9BXN2 247 aa16.35■□□□□ 0.21
TOP3A-213ENST00000582230 F2RL2O00254 374 aa16.34■□□□□ 0.21
TOP3A-213ENST00000582230 HBZP02008 142 aa16.34■□□□□ 0.21
TOP3A-213ENST00000582230 NFYBP25208 207 aa16.34■□□□□ 0.21
TOP3A-213ENST00000582230 TALDO1P37837 337 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms