RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 TMEM106AQ96A25 262 aa11.34□□□□□ -0.59
CCDC57-214ENST00000582040 P2RX4Q99571 388 aa11.34□□□□□ -0.59
CCDC57-214ENST00000582040 IFT22Q9H7X7 185 aa11.34□□□□□ -0.59
CCDC57-214ENST00000582040 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC57-214ENST00000582040 ZFP57Q9NU63 452 aa11.34□□□□□ -0.59
CCDC57-214ENST00000582040 ING4Q9UNL4 249 aa11.34□□□□□ -0.59
CCDC57-214ENST00000582040 LINC01548A6NM66 108 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 GEMIN2O14893 280 aaKnown RBP11.33□□□□□ -0.6
CCDC57-214ENST00000582040 CSTBP04080 98 aaKnown RBP11.33□□□□□ -0.6
CCDC57-214ENST00000582040 GAPDHP04406 335 aaKnown RBP11.33□□□□□ -0.6
CCDC57-214ENST00000582040 SERPINA2P20848 420 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 GPR12P47775 334 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 PPP3R1P63098 170 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 EBI3Q14213 229 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 NHLRC3Q5JS37 347 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 FAM53AQ6NSI3 398 aaPredicted RBP11.33□□□□□ -0.6
CCDC57-214ENST00000582040 ZNF695Q8IW36 515 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 Q8N6K4 173 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 OR52N1Q8NH53 320 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 NEK7Q8TDX7 302 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 APH1BQ8WW43 257 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 ARL11Q969Q4 196 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 ORAI1Q96D31 301 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 EAF1Q96JC9 268 aaPredicted RBP11.33□□□□□ -0.6
CCDC57-214ENST00000582040 B9D2Q9BPU9 175 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 C9orf16Q9BUW7 83 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 METTL9Q9H1A3 318 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 IL36GQ9NZH8 169 aa11.33□□□□□ -0.6
CCDC57-214ENST00000582040 RPL36Q9Y3U8 105 aaKnown RBP11.33□□□□□ -0.6
CCDC57-214ENST00000582040 IGHV3-43A0A0B4J1X8 118 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 NCBP2LA6PVI3 153 aaKnown RBP11.32□□□□□ -0.6
CCDC57-214ENST00000582040 H0YHG0 523 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 C15orf65H3BRN8 121 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 AP4M1O00189 453 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 SDCBPO00560 298 aaPredicted RBP11.32□□□□□ -0.6
CCDC57-214ENST00000582040 IGHV3-43DP0DP04 118 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 ZNF93P35789 620 aaPredicted RBP11.32□□□□□ -0.6
CCDC57-214ENST00000582040 RAB25P57735 213 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 KLHL22Q53GT1 634 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 ATAD3CQ5T2N8 411 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 RPL22L1Q6P5R6 122 aaKnown RBP11.32□□□□□ -0.6
CCDC57-214ENST00000582040 LCNL1Q6ZST4 164 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 TGIF2LXQ8IUE1 241 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 LINC00311Q8N616 119 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 OR13C5Q8NGS8 318 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 CCDC107Q8WV48 283 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 RAX2Q96IS3 184 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 S100A13Q99584 98 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 SLC29A1Q99808 456 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 TMEM138Q9NPI0 162 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 LIN7CQ9NUP9 197 aaKnown RBP11.32□□□□□ -0.6
CCDC57-214ENST00000582040 MRPS18AQ9NVS2 196 aaKnown RBP11.32□□□□□ -0.6
CCDC57-214ENST00000582040 GFOD1Q9NXC2 390 aa11.32□□□□□ -0.6
CCDC57-214ENST00000582040 LOC100130705A0A1B0GUX0 176 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 A0A1W2PP11 408 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
CCDC57-214ENST00000582040 GZMHP20718 246 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 IL3RAP26951 378 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 BDKRB2P30411 391 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 ETV1P50549 477 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 DCTN2Q13561 401 aaKnown RBP11.31□□□□□ -0.6
CCDC57-214ENST00000582040 SMN1Q16637 294 aaKnown RBP11.31□□□□□ -0.6
CCDC57-214ENST00000582040 MPV17LQ2QL34 196 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 DEFB136Q30KP8 78 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 SLC22A6Q4U2R8 563 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 OR2G6Q5TZ20 316 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 TEX38Q6PEX7 206 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 LINC00596Q86U02 117 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 Q8N9W7 124 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 OR52M1Q8NGK5 317 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 OR2T10Q8NGZ9 312 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 RTN4IP1Q8WWV3 396 aaPredicted RBP11.31□□□□□ -0.6
CCDC57-214ENST00000582040 ABCG5Q9H222 651 aa11.31□□□□□ -0.6
CCDC57-214ENST00000582040 FGF20Q9NP95 211 aaPredicted RBP11.31□□□□□ -0.6
CCDC57-214ENST00000582040 MAGEA13PA6NCF6 341 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 AIPO00170 330 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 CCL24O00175 119 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 SLC31A2O15432 143 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 ORC5O43913 435 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 LUMP51884 338 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-214ENST00000582040 DGCR2P98153 550 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 RIPK1Q13546 671 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 PNLIPRP3Q17RR3 467 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 CCDC58Q4VC31 144 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 CXorf66Q5JRM2 361 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-214ENST00000582040 UNQ9370/PRO34162Q6UXP9 181 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 ZNF497Q6ZNH5 498 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 C8orf31Q8N9H6 132 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 TMEM104Q8NE00 496 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 TFAP2CQ92754 450 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 ST6GALNAC6Q969X2 333 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 SMIM19Q96E16 107 aa11.3□□□□□ -0.6
CCDC57-214ENST00000582040 ZNF184Q99676 751 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-214ENST00000582040 PAK1IP1Q9NWT1 392 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-214ENST00000582040 SIRT4Q9Y6E7 314 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-214ENST00000582040 ZNF736B4DX44 427 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-214ENST00000582040 RRP9O43818 475 aaKnown RBP11.29□□□□□ -0.6
CCDC57-214ENST00000582040 ZNF780AO75290 641 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-214ENST00000582040 WBP4O75554 376 aaKnown RBP11.29□□□□□ -0.6
CCDC57-214ENST00000582040 MOSP00540 346 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms