RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 TERB2Q8NHR7 220 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 CCDC107Q8WV48 283 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 ZNF2Q9BSG1 426 aaPredicted RBP10.51□□□□□ -0.73
SRSF1-204ENST00000581979 OR51J1Q9H342 316 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 GHITMQ9H3K2 345 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 GPN1Q9HCN4 374 aaPredicted RBP10.51□□□□□ -0.73
SRSF1-204ENST00000581979 CBLN4Q9NTU7 201 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 VSIG4Q9Y279 399 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 JMJD1CQ15652 2540 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 TRDCB7Z8K6 153 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 PSPNO60542 156 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 NDUFS7O75251 213 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 CCNKO75909 580 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 IL5P05113 134 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 HNRNPCP07910 306 aaKnown RBP eCLIP10.5□□□□□ -0.732e-10■□□□□ 9.7
SRSF1-204ENST00000581979 TRAPPC2P0DI81 140 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 TRAPPC2BP0DI82 140 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 VSIG10L2P0DP72 767 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 NPY4RP50391 375 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 KRTAP1-1Q07627 177 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 SWI5Q1ZZU3 235 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 FAM201AQ5SY85 155 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 ATPAF1Q5TC12 328 aaPredicted RBP10.5□□□□□ -0.73
SRSF1-204ENST00000581979 ZNF497Q6ZNH5 498 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 Q6ZS49 121 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 CD177Q8N6Q3 437 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 ASCC1Q8N9N2 400 aaKnown RBP10.5□□□□□ -0.73
SRSF1-204ENST00000581979 MARCH1Q8TCQ1 289 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 MRGPRFQ96AM1 343 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 SEC22CQ9BRL7 303 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 REG4Q9BYZ8 158 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 MED28Q9H204 178 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 METRNQ9UJH8 293 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 TRAPPC2LQ9UL33 140 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 IGKV1D-17A0A075B6S4 117 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 RNF223E7ERA6 249 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 FABP7O15540 132 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 SSNA1O43805 119 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 GLP1RP43220 463 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 KCNJ3P48549 501 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 RRAS2P62070 204 aaPredicted RBP10.5□□□□□ -0.73
SRSF1-204ENST00000581979 C4orf46Q504U0 113 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 MOB1BQ7L9L4 216 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 LHFPL1Q86WI0 220 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 C1orf87Q8N0U7 546 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 SCGB3A2Q96PL1 93 aa10.5□□□□□ -0.73
SRSF1-204ENST00000581979 VRK1Q99986 396 aaPredicted RBP10.5□□□□□ -0.73
SRSF1-204ENST00000581979 CR1P17927 2039 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 TMEM30CPA0ZSE6 113 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 POM121CA8CG34 1229 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 CREBL2O60519 120 aaPredicted RBP10.49□□□□□ -0.73
SRSF1-204ENST00000581979 ZNF205O95201 554 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 HPXP02790 462 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 SCTP09683 121 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 FPR2P25090 351 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 ECI1P42126 302 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 OR3A1P47881 315 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 SEC61A1P61619 476 aaKnown RBP10.49□□□□□ -0.73
SRSF1-204ENST00000581979 HLA-DRB3P79483 266 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 ZNF880Q6PDB4 577 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 SLC36A1Q7Z2H8 476 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 PPP1R35Q8TAP8 253 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 MED30Q96HR3 178 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 SEBOXQ9HB31 216 aaPredicted RBP10.49□□□□□ -0.73
SRSF1-204ENST00000581979 ZNF69Q9UC07 566 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 MGAT4AQ9UM21 535 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 TANC2Q9HCD6 1990 aa10.49□□□□□ -0.73
SRSF1-204ENST00000581979 ABCA1O95477 2261 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 OOEPA6NGQ2 149 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 OR5H14A6NHG9 310 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 SNRPGP15A8MWD9 76 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 INAFM1C9JVW0 142 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 OR4E1P0C645 316 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 PGAM2P15259 253 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 RCC1P18754 421 aaPredicted RBP10.48□□□□□ -0.73
SRSF1-204ENST00000581979 FCGR2CP31995 323 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 PPOXP50336 477 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 AESQ08117 197 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 CD300CQ08708 224 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 IGSF11Q5DX21 431 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 KRBOX4Q5JUW0 171 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 AADACL3Q5VUY0 350 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 ZNF626Q68DY1 528 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 SLC35E4Q6ICL7 350 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 C17orf107Q6ZR85 190 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 C5orf24Q7Z6I8 188 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 GAPTQ8N292 157 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 DEFB108BQ8NET1 73 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 OR52B4Q8NGK2 314 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 CAPSLQ8WWF8 208 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 CCL17Q92583 94 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 SNX22Q96L94 193 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 TMPRSS13Q9BYE2 586 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 ALX4Q9H161 411 aaPredicted RBP10.48□□□□□ -0.73
SRSF1-204ENST00000581979 DCAF16Q9NXF7 216 aa10.48□□□□□ -0.73
SRSF1-204ENST00000581979 TRAV39A0A0B4J263 110 aa10.47□□□□□ -0.73
SRSF1-204ENST00000581979 A8MV72 311 aaPredicted RBP10.47□□□□□ -0.73
SRSF1-204ENST00000581979 BET1O15155 118 aa10.47□□□□□ -0.73
SRSF1-204ENST00000581979 CTXN2P0C2S0 81 aa10.47□□□□□ -0.73
SRSF1-204ENST00000581979 MUC1P15941 1255 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms