RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 PLA2G7Q13093 441 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 SRSF7Q16629 238 aaKnown RBP eCLIP9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 MOGAT2Q3SYC2 334 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 ZNF260Q3ZCT1 412 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 PLAC9Q5JTB6 97 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 METTL11BQ5VVY1 283 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 DCAF12L2Q5VW00 463 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 RSBN1Q5VWQ0 802 aaPredicted RBP9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 DUX4L9Q6RFH8 374 aaPredicted RBP9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 GAPTQ8N292 157 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 CORO2AQ92828 525 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 ST6GAL2Q96JF0 529 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 C18orf12Q96KH6 178 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 ZNF714Q96N38 554 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 MARVELD1Q9BSK0 173 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 MMP28Q9H239 520 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 AUNIPQ9H7T9 357 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 IFT46Q9NQC8 304 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 DUX4Q9UBX2 424 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 AK3Q9UIJ7 227 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 KIF25Q9UIL4 384 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 KPTNQ9Y664 436 aa9.73□□□□□ -0.85
SNORD3C-201ENST00000580533 LINC00854A0A1B0GVQ3 168 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 TMEM235A6NFC5 223 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 ZNF729A6NN14 1252 aaPredicted RBP9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 FAM157AC9JC47 383 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 M0R1W7 72 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 SMAD7O15105 426 aaKnown RBP9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 CTDSPLO15194 276 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 GSTZ1O43708 216 aaPredicted RBP9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 ORC5O43913 435 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 NAPSAO96009 420 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 TGFAP01135 160 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 MT-ND4P03905 459 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 LPLP06858 475 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 GLIPR1P48060 266 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 INPP1P49441 399 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 ACTBP60709 375 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 SEC61A1P61619 476 aaKnown RBP9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 ACTG1P63261 375 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 OR52W1Q6IF63 320 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 BRICD5Q6PL45 260 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 PLET1Q6UQ28 207 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 C1orf122Q6ZSJ8 110 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 OR10A7Q8NGE5 316 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 FCAMRQ8WWV6 532 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 TRIM63Q969Q1 353 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 TMEM186Q96B77 213 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 COQ2Q96H96 371 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 THAP7Q9BT49 309 aaPredicted RBP9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 ZMAT3Q9HA38 289 aaKnown RBP9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 ZNF286AQ9HBT8 521 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 ING3Q9NXR8 418 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 ONECUT1Q9UBC0 465 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 NOTCH2Q04721 2471 aa9.72□□□□□ -0.85
SNORD3C-201ENST00000580533 PRRC2AP48634 2157 aaKnown RBP9.71□□□□□ -0.85
SNORD3C-201ENST00000580533 FAM240BA0A1B0GVZ2 78 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 KIAA1324LA8MWY0 1029 aaPredicted RBP9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 ATP6V1G1O75348 118 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 DIRAS3O95661 229 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 ZNF728P0DKX0 622 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 IGHV4-31P0DP07 118 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 CD99P14209 185 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 IL2RGP31785 369 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 SSBP1Q04837 148 aaKnown RBP9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 NCR3LG1Q68D85 454 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 IZUMO1Q8IYV9 350 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 LY6G5BQ8NDX9 201 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 PLPPR1Q8TBJ4 325 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 MRPL30Q8TCC3 161 aaKnown RBP9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 CREB3L1Q96BA8 519 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 ZNF486Q96H40 463 aaPredicted RBP9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 C7orf50Q9BRJ6 194 aaKnown RBP9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 METTL8Q9H825 291 aaKnown RBP9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 LPAR2Q9HBW0 351 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 C19orf12Q9NSK7 152 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 HIF1ANQ9NWT6 349 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 KCNS2Q9ULS6 477 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 CSMD2Q7Z408 3487 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 PDZD2O15018 2839 aa9.71□□□□□ -0.86
SNORD3C-201ENST00000580533 CCDC168Q8NDH2 2452 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 A0A0B4J293 547 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 KBTBD11-OT1A0A1B0GTJ5 212 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 C22orf46C9J442 243 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 GABARAPH6UMI1 98 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 RGS11O94810 467 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 FCGR3AP08637 254 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 CTXN2P0C2S0 81 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 HNF1AP20823 631 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 ZFP36P26651 326 aaKnown RBP9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 SLC6A1P30531 599 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 RCVRNP35243 200 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 ERVFRD-1P60508 538 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 CR1LQ2VPA4 569 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 PLA1AQ53H76 456 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 ZNF57Q68EA5 555 aaPredicted RBP9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 TMEM200BQ69YZ2 307 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 Q6ZS49 121 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 BIVMQ86UB2 503 aa9.7□□□□□ -0.86
SNORD3C-201ENST00000580533 TPRX1Q8N7U7 411 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms