RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 A0A1W2PP11 408 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 A0A1W2PPK0 400 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 IRGMA1A4Y4 181 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FAM90A18PA6NE21 464 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FAM90A16PA6NEW6 464 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FAM90A20PA6NIJ5 464 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FAM90A9PA6NNJ1 464 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FAM90A12PA8MX19 464 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FAM90A5PA8MXJ8 464 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 NPIPB11E5RHQ5 1161 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 AIPO00170 330 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 WBP4O75554 376 aaKnown RBP7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 GAPDHP04406 335 aaKnown RBP7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FAM90A15PP0C7V4 464 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FAM90A13PP0C7W8 464 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FAM90A14PP0C7W9 464 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FAM90A24PP0C7X0 464 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 GTF2F2P13984 249 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 HOXD3P31249 432 aaPredicted RBP7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 SLC35B1P78383 322 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 MED21Q13503 144 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 DEFB121Q5J5C9 76 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 SLC35E3Q7Z769 313 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 LINC00596Q86U02 117 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FOXRED2Q8IWF2 684 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 OR8H3Q8N146 312 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 STX19Q8N4C7 294 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 JAGN1Q8N5M9 183 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 WFDC9Q8NEX5 89 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 OR10A7Q8NGE5 316 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 OR51D1Q8NGF3 324 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 CHPT1Q8WUD6 406 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 DPF1Q92782 380 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 GHSRQ92847 366 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 TMEM80Q96HE8 168 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 RCC1LQ96I51 464 aaKnown RBP7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 NCOR1P1Q9H4R4 102 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 IL36GQ9NZH8 169 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 CLEC2DQ9UHP7 191 aa7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 EXOSC1Q9Y3B2 195 aaKnown RBP7.3□□□□□ -1.24
CDK5RAP3-211ENST00000578996 IGHV1-3A0A0C4DH29 117 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 MAGEA13PA6NCF6 341 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FGF16O43320 207 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 ZNF780AO75290 641 aaPredicted RBP7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 DUS4LO95620 317 aaKnown RBP7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 LALBAP00709 142 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 MAS1P04201 325 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 GZMHP20718 246 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 IL3RAP26951 378 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 RAB25P57735 213 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 RPL23AP62750 156 aaKnown RBP7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 PAX5Q02548 391 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 MPV17LQ2QL34 196 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 NHLRC3Q5JS37 347 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 AWAT2Q6E213 333 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 FAM53AQ6NSI3 398 aaPredicted RBP7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 ASCL4Q6XD76 172 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 SLC16A12Q6ZSM3 486 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 C18orf65Q6ZTR6 163 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 C8orf86Q6ZUL3 223 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 KLHL30-AS1Q8NEE0 82 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 Q8NFD4 153 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 MUL1Q969V5 352 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 RDH12Q96NR8 316 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 IFT22Q9H7X7 185 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 LINC00574Q9H8X3 128 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 ETAA1Q9NY74 926 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 TRAPPC2LQ9UL33 140 aa7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 DIMT1Q9UNQ2 313 aaKnown RBP7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 MRPS28Q9Y2Q9 187 aaKnown RBP7.29□□□□□ -1.24
CDK5RAP3-211ENST00000578996 DNAH3Q8TD57 4116 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 TRAV8-7A0A075B6U6 113 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 MCRIP1C9JLW8 97 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 K7EIL1 84 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 OGG1O15527 345 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 IGFBP3P17936 291 aaPredicted RBP7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 KRTAP10-11P60412 298 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 ZNF816Q0VGE8 651 aaPredicted RBP7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 GPR176Q14439 515 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 Q499Y3 187 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 YIF1BQ5BJH7 314 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 SYT6Q5T7P8 510 aaPredicted RBP7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 TTC23Q5W5X9 447 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 GLIPR1L1Q6UWM5 242 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 OR2W3Q7Z3T1 314 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 MRPL41Q8IXM3 137 aaKnown RBP7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 STPG2Q8N412 459 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 LINC00482Q8N8I6 264 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 SETD9Q8NE22 299 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 OR10V1Q8NGI7 309 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 OR2T10Q8NGZ9 312 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 OR4K15Q8NH41 348 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 RBMXL1Q96E39 390 aaKnown RBP7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 EAF1Q96JC9 268 aaPredicted RBP7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 DUX3Q96PT4 197 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 OR14A2Q96R54 314 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 BANF2Q9H503 90 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 GFOD1Q9NXC2 390 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 GNG12Q9UBI6 72 aa7.28□□□□□ -1.24
CDK5RAP3-211ENST00000578996 KIAA2026Q5HYC2 2103 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms