RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 NKX1-2Q9UD57 310 aaPredicted RBP11.62□□□□□ -0.55
CCDC57-212ENST00000578910 MRPS28Q9Y2Q9 187 aaKnown RBP11.62□□□□□ -0.55
CCDC57-212ENST00000578910 NOTCH1P46531 2555 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 G3V4G9 280 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 OR2F2O95006 317 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 LPLP06858 475 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 FSTP19883 344 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 GNG10P50151 68 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 CD83Q01151 205 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 MPV17LQ2QL34 196 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 LINC00596Q86U02 117 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 NDUFA11Q86Y39 141 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 LYPD6Q86Y78 171 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 THNSL2Q86YJ6 484 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 CDH26Q8IXH8 852 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 UBALD1Q8TB05 177 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 NEK7Q8TDX7 302 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 ARL11Q969Q4 196 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 RPEQ96AT9 228 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 AKR1E2Q96JD6 320 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 DCLRE1BQ9H816 532 aa11.61□□□□□ -0.55
CCDC57-212ENST00000578910 TMEM30CPA0ZSE6 113 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 PTGES3LE9PB15 166 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 C15orf65H3BRN8 121 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 MYL12BO14950 172 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 FAM106CPP0CH98 169 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 VHLP40337 213 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 INSL4Q14641 139 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 C9orf152Q5JTZ5 239 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 C6orf141Q5SZD1 244 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 FAM53AQ6NSI3 398 aaPredicted RBP11.6□□□□□ -0.55
CCDC57-212ENST00000578910 CCDC144NLQ6NUI1 221 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 UNQ9370/PRO34162Q6UXP9 181 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 ZNF497Q6ZNH5 498 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 TOMM40LQ969M1 308 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 R3HDM4Q96D70 268 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 BANF2Q9H503 90 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 ERGIC3Q9Y282 383 aa11.6□□□□□ -0.55
CCDC57-212ENST00000578910 AMMECR1Q9Y4X0 333 aaPredicted RBP11.6□□□□□ -0.55
CCDC57-212ENST00000578910 PLXNB1O43157 2135 aa11.59□□□□□ -0.55
CCDC57-212ENST00000578910 CDK1P06493 297 aa11.59□□□□□ -0.55
CCDC57-212ENST00000578910 SNRNP70P08621 437 aaKnown RBP11.59□□□□□ -0.55
CCDC57-212ENST00000578910 GP2P55259 537 aaKnown RBP11.59□□□□□ -0.55
CCDC57-212ENST00000578910 MADCAM1Q13477 382 aa11.59□□□□□ -0.55
CCDC57-212ENST00000578910 HNF4GQ14541 408 aa11.59□□□□□ -0.55
CCDC57-212ENST00000578910 TCTEX1D4Q5JR98 221 aa11.59□□□□□ -0.55
CCDC57-212ENST00000578910 C10orf99Q6UWK7 81 aa11.59□□□□□ -0.55
CCDC57-212ENST00000578910 DRAM1Q8N682 238 aa11.59□□□□□ -0.55
CCDC57-212ENST00000578910 TMEM104Q8NE00 496 aa11.59□□□□□ -0.55
CCDC57-212ENST00000578910 OR52M1Q8NGK5 317 aa11.59□□□□□ -0.55
CCDC57-212ENST00000578910 OR56B4Q8NH76 319 aa11.59□□□□□ -0.55
CCDC57-212ENST00000578910 MRPS24Q96EL2 167 aaKnown RBP11.59□□□□□ -0.55
CCDC57-212ENST00000578910 CYYR1Q96J86 154 aa11.59□□□□□ -0.55
CCDC57-212ENST00000578910 IGHV3-43A0A0B4J1X8 118 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 A0A1W2PPI3 338 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 MCRIP1C9JLW8 97 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 ORC5O43913 435 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 IGHV3-43DP0DP04 118 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 LOXL3P58215 753 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 BEAN1Q3B7T3 259 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 ACSM3Q53FZ2 586 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 SYT6Q5T7P8 510 aaPredicted RBP11.58□□□□□ -0.56
CCDC57-212ENST00000578910 SAMD5Q5TGI4 173 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 RNLSQ5VYX0 342 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 AWAT2Q6E213 333 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 OR10X1Q8NGY0 326 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 OR4K15Q8NH41 348 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 NRG4Q8WWG1 115 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 SGCDQ92629 289 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 SELENOIQ9C0D9 397 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 VCXQ9H320 206 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 RCC2Q9P258 522 aaKnown RBP11.58□□□□□ -0.56
CCDC57-212ENST00000578910 PEX16Q9Y5Y5 336 aa11.58□□□□□ -0.56
CCDC57-212ENST00000578910 A0A1W2PRX2 142 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 M0QZK8 103 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 AIPO00170 330 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 SDCBPO00560 298 aaPredicted RBP11.57□□□□□ -0.56
CCDC57-212ENST00000578910 CRTAPO75718 401 aaPredicted RBP11.57□□□□□ -0.56
CCDC57-212ENST00000578910 GAPDHP04406 335 aaKnown RBP11.57□□□□□ -0.56
CCDC57-212ENST00000578910 MGMTP16455 207 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 RAB7AP51149 207 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 HES1Q14469 280 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 OXLD1Q5BKU9 147 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 FAM27D1Q5T7N8 215 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 SIGIRRQ6IA17 410 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 RAB12Q6IQ22 244 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 MOB3BQ86TA1 216 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 OR8H3Q8N146 312 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 LINC00311Q8N616 119 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 OR4F17Q8NGA8 305 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 MYDGFQ969H8 173 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 OR4F4Q96R69 305 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 SPACA1Q9HBV2 294 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 GFOD1Q9NXC2 390 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 SCN3BQ9NY72 215 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 ETAA1Q9NY74 926 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 TRAPPC2LQ9UL33 140 aa11.57□□□□□ -0.56
CCDC57-212ENST00000578910 TCRBV4S1A1TA0A5B7 111 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 UBE2QL1A1L167 161 aa11.56□□□□□ -0.56
CCDC57-212ENST00000578910 C12orf77C9JDV5 145 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms