RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 VCANP13611 3396 aa9.4□□□□□ -0.91
SKA2-204ENST00000578519 LRRC30A6NM36 301 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 SRRM5B3KS81 715 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 ATP6V1G2-DDX39BF2Z307 99 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 SPINT2O43291 252 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 ADAP1O75689 374 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 CDS2O95674 445 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 WNT2P09544 360 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 LYL1P12980 280 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 PVALBP20472 110 aaPredicted RBP9.39□□□□□ -0.91
SKA2-204ENST00000578519 GNRHRP30968 328 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 PRDX2P32119 198 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 CA7P43166 264 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 GATA4P43694 442 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 ID4P47928 161 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 PAX5Q02548 391 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 EXOSC2Q13868 293 aaKnown RBP9.39□□□□□ -0.91
SKA2-204ENST00000578519 GNMTQ14749 295 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 DAZAP2Q15038 168 aaPredicted RBP9.39□□□□□ -0.91
SKA2-204ENST00000578519 HMGN3Q15651 99 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 IGFBP7Q16270 282 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 FAM209AQ5JX71 171 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 IL1F10Q8WWZ1 152 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 CNTNAP3BQ96NU0 1288 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 DMRTA2Q96SC8 542 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 CNTNAP3Q9BZ76 1288 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 TMEM222Q9H0R3 208 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 PLEKHF2Q9H8W4 249 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 TAF9BQ9HBM6 251 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 MBD2Q9UBB5 411 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 RNF7Q9UBF6 113 aa9.39□□□□□ -0.91
SKA2-204ENST00000578519 ERRFI1Q9UJM3 462 aaPredicted RBP9.39□□□□□ -0.91
SKA2-204ENST00000578519 LINC00862A6NCI5 91 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 TMEM8BA6NDV4 472 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 E5RGE8 158 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 F5H0A9 414 aaPredicted RBP9.38□□□□□ -0.91
SKA2-204ENST00000578519 H0Y980 276 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 MGST3O14880 152 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 SPRY3O43610 288 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 SERPINE2P07093 398 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 ADH4P08319 380 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 CHRNB4P30926 498 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 GABRA2P47869 451 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 S100A10P60903 97 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 TESK1Q15569 626 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 KRBOX4Q5JUW0 171 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 ZNF826PQ6ZT77 177 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 TBC1D26Q86UD7 250 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 LDLRAD3Q86YD5 345 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 SLC7A5P1Q8MH63 180 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 C1orf87Q8N0U7 546 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 TCTEX1D1Q8N7M0 179 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 BVESQ8NE79 360 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 PLPPR1Q8TBJ4 325 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 C18orf12Q96KH6 178 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 TMEM56Q96MV1 263 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 OR2V2Q96R30 315 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 NSG2Q9Y328 171 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 TMEM56-RWDD3S4R434 201 aa9.38□□□□□ -0.91
SKA2-204ENST00000578519 CNOT1A5YKK6 2376 aaKnown RBP9.38□□□□□ -0.91
SKA2-204ENST00000578519 WDR87Q6ZQQ6 2873 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 C1QTNF9BB2RNN3 333 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 HSD17B6O14756 317 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 ST8SIA3O43173 380 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 HEXAP06865 529 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 TPT1P13693 172 aaKnown RBP9.37□□□□□ -0.91
SKA2-204ENST00000578519 RCC1P18754 421 aaPredicted RBP9.37□□□□□ -0.91
SKA2-204ENST00000578519 UCP1P25874 307 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 CEACAM6P40199 344 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 COL10A1Q03692 680 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 ATXN7L3Q14CW9 347 aaPredicted RBP9.37□□□□□ -0.91
SKA2-204ENST00000578519 TMEM30BQ3MIR4 351 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 FBXL19-AS1Q494R0 122 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 GPR157Q5UAW9 335 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 PCSK4Q6UW60 755 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 ZNF561Q8N587 486 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 RELL2Q8NC24 303 aaPredicted RBP9.37□□□□□ -0.91
SKA2-204ENST00000578519 Q8TCH9 128 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 GLYATL2Q8WU03 294 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 ITLN1Q8WWA0 313 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 EDARADDQ8WWZ3 215 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 MSI2Q96DH6 328 aaKnown RBP9.37□□□□□ -0.91
SKA2-204ENST00000578519 OR10C1Q96KK4 312 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 AQP10Q96PS8 301 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 ZNF471Q9BX82 626 aaPredicted RBP9.37□□□□□ -0.91
SKA2-204ENST00000578519 MRPL37Q9BZE1 423 aaKnown RBP9.37□□□□□ -0.91
SKA2-204ENST00000578519 TOLLIPQ9H0E2 274 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 SLC25A32Q9H2D1 315 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 LIME1Q9H400 295 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 CCL28Q9NRJ3 127 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 LIN7CQ9NUP9 197 aaKnown RBP9.37□□□□□ -0.91
SKA2-204ENST00000578519 OR6C3Q9NZP0 311 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 PFDN2Q9UHV9 154 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 SESN1Q9Y6P5 492 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 FAM186AA6NE01 2351 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 MYO7BQ6PIF6 2116 aa9.37□□□□□ -0.91
SKA2-204ENST00000578519 RTTNQ86VV8 2226 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 ZSCAN5BA6NJL1 495 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.36□□□□□ -0.91
SKA2-204ENST00000578519 K7EPK0 472 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms