RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ZNF554Q86TJ5 538 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 SNX29P2Q8IUI4 249 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 OR2C3Q8N628 320 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 OR4S1Q8NGB4 309 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 OR52I2Q8NH67 350 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 DEDD2Q8WXF8 326 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 NEIL1Q96FI4 390 aaPredicted RBP6.64□□□□□ -1.35
COPS3-215ENST00000578317 CMSS1Q9BQ75 279 aaKnown RBP6.64□□□□□ -1.35
COPS3-215ENST00000578317 THAP7Q9BT49 309 aaPredicted RBP6.64□□□□□ -1.35
COPS3-215ENST00000578317 BPESC1Q9GZL8 116 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 PATZ1Q9HBE1 687 aaKnown RBP6.64□□□□□ -1.35
COPS3-215ENST00000578317 C12orf4Q9NQ89 552 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 ETAA1Q9NY74 926 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 AK3Q9UIJ7 227 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 ELF5Q9UKW6 265 aaPredicted RBP6.64□□□□□ -1.35
COPS3-215ENST00000578317 ANAPC10Q9UM13 185 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 PDZD2O15018 2839 aa6.64□□□□□ -1.35
COPS3-215ENST00000578317 UBE2QL1A1L167 161 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 MEIOCA2RUB1 952 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 NDUFB3O43676 98 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 ECDO95905 644 aaPredicted RBP6.63□□□□□ -1.35
COPS3-215ENST00000578317 SLC25A16P16260 332 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 P2RX3P56373 397 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 MRPS15P82914 257 aaKnown RBP6.63□□□□□ -1.35
COPS3-215ENST00000578317 MEF2CQ06413 473 aaPredicted RBP6.63□□□□□ -1.35
COPS3-215ENST00000578317 CD69Q07108 199 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 ARFRP1Q13795 201 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 GRK1Q15835 563 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 BAK1Q16611 211 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 AVPI1Q5T686 147 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 RSBN1Q5VWQ0 802 aaPredicted RBP6.63□□□□□ -1.35
COPS3-215ENST00000578317 RTN4RL2Q86UN3 420 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 HOGA1Q86XE5 327 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 ASCC1Q8N9N2 400 aaKnown RBP6.63□□□□□ -1.35
COPS3-215ENST00000578317 CORO2AQ92828 525 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 COQ2Q96H96 371 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 PIMREGQ9BSJ6 248 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 PPA2Q9H2U2 334 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 LINC00574Q9H8X3 128 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 TAS2R8Q9NYW2 309 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 SLC25A10Q9UBX3 287 aaPredicted RBP6.63□□□□□ -1.35
COPS3-215ENST00000578317 KLK11Q9UBX7 282 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 OPN4Q9UHM6 478 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 MGAT4AQ9UM21 535 aa6.63□□□□□ -1.35
COPS3-215ENST00000578317 ARID1AO14497 2285 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 TMEM30CPA0ZSE6 113 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 ISPDA4D126 451 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 DVL1O14640 695 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 ORC5O43913 435 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 FCN3O75636 299 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 GSTT2BP0CG30 244 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 PTHLHP12272 177 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 ACTBP60709 375 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 LMO4P61968 165 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 ACTG1P63261 375 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 DGCR2P98153 550 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 AESQ08117 197 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 CARTPTQ16568 116 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 CLEC12BQ2HXU8 276 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 KRBOX4Q5JUW0 171 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 WDR25Q64LD2 544 aaPredicted RBP6.62□□□□□ -1.35
COPS3-215ENST00000578317 TMEM200BQ69YZ2 307 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 GDPD3Q7L5L3 318 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 MOB1BQ7L9L4 216 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 FAM216BQ8N7L0 139 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 ZNF565Q8N9K5 539 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 OR8B3Q8NGG8 313 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 PLPPR1Q8TBJ4 325 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 MRPL30Q8TCC3 161 aaKnown RBP6.62□□□□□ -1.35
COPS3-215ENST00000578317 NEK7Q8TDX7 302 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 DYRK2Q92630 601 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 BORCS5Q969J3 196 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 TRIM63Q969Q1 353 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 OR8B2Q96RD0 313 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 FOXC2Q99958 501 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 Q9N2K0 584 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 PALMDQ9NP74 551 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 OR6C3Q9NZP0 311 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 CTSZQ9UBR2 303 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 LPAR3Q9UBY5 353 aa6.62□□□□□ -1.35
COPS3-215ENST00000578317 DYSFO75923 2080 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 IGHV4-30-2A0A087WSY4 118 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 A0A1B0GW55 424 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 ODAMA1E959 279 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 CYSRT1A8MQ03 144 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 HSPB6O14558 160 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 UPK1BO75841 260 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 DIRAS3O95661 229 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 IGHV2-5P01817 119 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 TFF1P04155 84 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 FCGR3AP08637 254 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 DUX4L2P0CJ85 424 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 DUX4L3P0CJ86 424 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 DUX4L4P0CJ87 422 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 DUX4L5P0CJ88 424 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 DUX4L6P0CJ89 424 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 DUX4L7P0CJ90 424 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 CGB3P0DN86 165 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 CGB7P0DN87 165 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 SELLP14151 372 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms