RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 NPPCP23582 126 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 PEBP1P30086 187 aaKnown RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 PRSS12P56730 875 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ZNF561Q8N587 486 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ZNF738Q8NE65 137 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 GPR32P1Q8NGA4 272 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 NUDCD2Q8WVJ2 157 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 TMED6Q8WW62 240 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SSMEM1Q8WWF3 244 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SLC25A46Q96AG3 418 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SCMH1Q96GD3 660 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 IMMP1LQ96LU5 166 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 MOGAT1Q96PD6 335 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 DERL3Q96Q80 235 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 OR2M2Q96R28 347 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 NRIP2Q9BQI9 281 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SEC22CQ9BRL7 303 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ZNF426Q9BUY5 554 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 LINC00470Q9BZP3 86 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 CEPT1Q9Y6K0 416 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 DOCK7Q96N67 2140 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 TCRBV3S1A0A5B6 114 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 OR4C46A6NHA9 309 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 TRDCB7Z8K6 153 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 NPIPB11E5RHQ5 1161 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 BOLA2-SMG1P6H3BVE0 249 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 AP4M1O00189 453 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 RGS13O14921 159 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SLC31A2O15432 143 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 INHBBP09529 407 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 WNT2P09544 360 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ACSM4P0C7M7 580 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 CECR9P0C854 216 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ZNF708P17019 499 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 GCSHP23434 173 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SORDQ00796 357 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 GK2Q14410 553 aaPredicted RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 IL13RA2Q14627 380 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 LRRC75BQ2VPJ9 315 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 C19orf54Q5BKX5 351 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 TMEM78Q5T7P6 136 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 PRR27Q6MZM9 219 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 RPUSD3Q6P087 351 aaKnown RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 DGAT2L6Q6ZPD8 337 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 DTX2Q86UW9 622 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 NR2C2APQ86WQ0 139 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 LSMEM1Q8N8F7 131 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 OR4A4PQ8NGN8 299 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 MRPL24Q96A35 216 aaKnown RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 RNF166Q96A37 237 aaPredicted RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 TMEM45BQ96B21 275 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 WDYHV1Q96HA8 205 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 VGLL1Q99990 258 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ZNF385DQ9H6B1 395 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 RNF122Q9H9V4 155 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ZNF275Q9NSD4 429 aaPredicted RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 ZNF446Q9NWS9 450 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 MRPS18CQ9Y3D5 142 aaKnown RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 MYO18BQ8IUG5 2567 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 PI4KAP42356 2102 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 CCDC168Q8NDH2 2452 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 BAHCC1Q9P281 2608 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 HIVEP2P31629 2446 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 PLCE1Q9P212 2302 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 A0A1B0GU03 582 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 KIAA1324LA8MWY0 1029 aaPredicted RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 SLC17A2O00624 439 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 PSCAO43653 123 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SEMG1P04279 462 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 PRB1P04280 392 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 LIMS3P0CW19 117 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 LIMS4P0CW20 117 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 APELAP0DMC3 54 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ZNF14P17017 642 aaPredicted RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 FGF7P21781 194 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 FAM3AP98173 230 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 FXYD3Q14802 87 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 CR1LQ2VPA4 569 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 CEACAM21Q3KPI0 293 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 HIST2H3PS2Q5TEC6 136 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 FAM122CQ6P4D5 195 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 STAC2Q6ZMT1 411 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 HSD17B13Q7Z5P4 300 aaPredicted RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 BCDIN3DQ7Z5W3 292 aaKnown RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 OR8B12Q8NGG6 310 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 OR52B4Q8NGK2 314 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 OR13F1Q8NGS4 319 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 OR10Z1Q8NGY1 313 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 OR2G3Q8NGZ4 309 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 RHOXF1Q8NHV9 184 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 FAM110DQ8TAY7 271 aaPredicted RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 MEGF10Q96KG7 1140 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 FCRL1Q96LA6 429 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 NIPSNAP3BQ9BS92 247 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 FAAP24Q9BTP7 215 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 TLNRD1Q9H1K6 362 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 OR51J1Q9H342 316 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 AKIRIN1Q9H9L7 192 aaPredicted RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 GPR27Q9NS67 375 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 UQCC1Q9NVA1 299 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms