RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 AK4P27144 223 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 KIR2DS4P43632 304 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 GYG1P46976 350 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 DAP3P51398 398 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 TCL1AP56279 114 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 RAB10P61026 200 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 RPL8P62917 257 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 MRPS10P82664 201 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 RHOGP84095 191 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 KLRC3Q07444 240 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 ST3GAL3Q11203 375 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 NME3Q13232 169 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 EXOSC2Q13868 293 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 GNMTQ14749 295 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 SYPL1Q16563 259 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 LTC4SQ16873 150 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 RPEL1Q2QD12 228 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 TTLL9Q3SXZ7 439 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 ACTL10Q5JWF8 245 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 COL5A1-AS1Q5SY13 56 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 LDLRAD2Q5SZI1 272 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 AKR1C8PQ5T2L2 129 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 TPTE2P1Q5T6R2 138 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM78Q5T7P6 136 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 TSPO2Q5TGU0 170 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 CST9Q5W186 159 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 RASSF6Q6ZTQ3 369 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF720Q7Z2F6 126 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 APRG1Q8IVJ8 170 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 CMTM1Q8IZ96 169 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 MS4A15Q8N5U1 240 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 BPIFB6Q8NFQ5 453 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 GPR32P1Q8NGA4 272 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 OR4S1Q8NGB4 309 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 OR52E4Q8NGH9 312 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 OR4D11Q8NGI4 311 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 OR4A4PQ8NGN8 299 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 HAVCR2Q8TDQ0 301 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 CASTOR1Q8WTX7 329 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 LCN9Q8WX39 176 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 MAGOHBQ96A72 148 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 APH1AQ96BI3 265 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 ROPN1LQ96C74 230 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 HYLS1Q96M11 299 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 OR2M2Q96R28 347 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 COPS8Q99627 209 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 GPR22Q99680 433 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM121Q9BTD3 319 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 PECRQ9BY49 303 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 LINC00470Q9BZP3 86 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 ARL6Q9H0F7 186 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 SLC25A51Q9H1U9 297 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 TXNIPQ9H3M7 391 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 CDC42EP4Q9H3Q1 356 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 ST3GAL6Q9Y274 331 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 POLDIP2Q9Y2S7 368 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 TIMM10BQ9Y5J6 103 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 UGGT2Q9NYU1 1516 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 CD109Q6YHK3 1445 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 ADAMTS12P58397 1594 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 MYH13Q9UKX3 1938 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 A0A0J9YY10 115 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 CENPVL3A0A0U1RRI6 287 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 KIR2DS1A0A191URI9 304 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 A0A1B0GX78 115 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 A0A1W2PRE2 83 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM218A2RU14 115 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 TRAPPC13A5PLN9 417 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 A6NDX4 124 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 SLC22A20A6NK97 555 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 LRRC30A6NM36 301 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 D6RAR5 112 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 SLC17A3O00476 420 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 UBFD1O14562 309 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 CASKO14936 926 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 ERI3O43414 337 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR7C2O60412 319 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 TPST2O60704 377 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 ENTPD6O75354 484 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 SYNGR4O95473 234 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 CFDP00746 253 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 INSP01308 110 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 VDAC1P21796 283 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 S100A2P29034 98 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 GRPRP30550 384 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 CDKN2BP42772 138 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 GABRA2P47869 451 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 QARSP47897 775 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 BIDP55957 195 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 PSG4Q00888 419 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 DEFA5Q01523 94 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF763Q0D2J5 394 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 C1orf61Q13536 156 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR2F1Q13607 317 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 HTR4Q13639 388 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF235Q14590 738 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 KIR2DS1Q14954 304 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 JOSD1Q15040 202 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 EBPQ15125 230 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 LY6EQ16553 131 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms