RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 RFPL4AA6NLU0 287 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 EFCAB9A8MZ26 197 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 RFPL4AL1F8VTS6 287 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 H7C2Y5 167 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 J3QLI3 93 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 TCAPO15273 167 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 CHP2O43745 196 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 CXCL13O43927 109 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 MPZL2O60487 215 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 SUPT3HO75486 399 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 WISP3O95389 354 aaPredicted RBP3.27□□□□□ -1.89
NUP88-213ENST00000576862 SERPINE1P05121 402 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 LIMS3P0CW19 117 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 LIMS4P0CW20 117 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 ICAM2P13598 275 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 ABOP16442 354 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 UGT2B7P16662 529 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 SHMT2P34897 504 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 CDKN2DP55273 166 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 RAB25P57735 213 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 FBXW4P57775 412 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 RAB8AP61006 207 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 ESRRGP62508 458 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 PRKCDQ05655 676 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 APOFQ13790 326 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 TBC1D28Q2M2D7 210 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 PYCR3Q53H96 274 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 TCEAL5Q5H9L2 206 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 FAM78AQ5JUQ0 283 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 CPTPQ5TA50 214 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 TMEM215Q68D42 235 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 MED27Q6P2C8 311 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 C22orf39Q6P5X5 142 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 IGFL3Q6UXB1 125 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 ZCCHC23Q6ZST2 131 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 Q6ZT83 130 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 S100A7AQ86SG5 101 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 C10orf107Q8IVU9 208 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 PIANPQ8IYJ0 282 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 CA13Q8N1Q1 262 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 OR2L13Q8N349 312 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 OR6K3Q8NGY3 331 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 OR51F2Q8NH61 342 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 OR10A6Q8NH74 314 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 NEIL3Q8TAT5 605 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 C11orf40Q8WZ69 217 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 RDH5Q92781 318 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 RERGQ96A58 199 aaPredicted RBP3.27□□□□□ -1.89
NUP88-213ENST00000576862 C12orf43Q96C57 262 aaKnown RBP3.27□□□□□ -1.89
NUP88-213ENST00000576862 NRTNQ99748 197 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 SEC22CQ9BRL7 303 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 MMP26Q9NRE1 261 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 MARCOQ9UEW3 520 aaPredicted RBP3.27□□□□□ -1.89
NUP88-213ENST00000576862 HHLA2Q9UM44 414 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 HS3ST2Q9Y278 367 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 TRIP11Q15643 1979 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 VWA8A3KMH1 1905 aa3.27□□□□□ -1.89
NUP88-213ENST00000576862 PLXNA3P51805 1871 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 CHD9Q3L8U1 2897 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 LTBP2Q14767 1821 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 PATJQ8NI35 1801 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 A0A0G2JND7 137 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 CXorf51AA0A1B0GTR3 108 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 C15orf65H3BRN8 121 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 SULT2B1O00204 365 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 ZNF593O00488 134 aaPredicted RBP3.26□□□□□ -1.89
NUP88-213ENST00000576862 BHLHE40O14503 412 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 AZIN1O14977 448 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 OR1I1O60431 355 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 HAND1O96004 215 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 OR8U9P0C7N5 309 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 CISD3P0C7P0 127 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 C1GALT1C1LP0DN25 315 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 IGFBP3P17936 291 aaPredicted RBP3.26□□□□□ -1.89
NUP88-213ENST00000576862 ALOX5APP20292 161 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 PVALBP20472 110 aaPredicted RBP3.26□□□□□ -1.89
NUP88-213ENST00000576862 COX5AP20674 150 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 OGNP20774 298 aaKnown RBP3.26□□□□□ -1.89
NUP88-213ENST00000576862 F2RP25116 425 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 S100PP25815 95 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 IL12AP29459 219 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 SLC6A1P30531 599 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 CA5AP35218 305 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 RFC3P40938 356 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 RPL5P46777 297 aaKnown RBP3.26□□□□□ -1.89
NUP88-213ENST00000576862 TFPI2P48307 235 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 SULT1A1P50225 295 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 SULT1A2P50226 295 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 SSR4P51571 173 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 OR10A3P58181 314 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 RPL26P61254 145 aaKnown RBP3.26□□□□□ -1.89
NUP88-213ENST00000576862 NCALDP61601 193 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 RPL31P62899 125 aaKnown RBP3.26□□□□□ -1.89
NUP88-213ENST00000576862 SEMG2Q02383 582 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 UNC119Q13432 240 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 HIST3H3Q16695 136 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 DUSP7Q16829 419 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 FAM71E1Q6IPT2 247 aa3.26□□□□□ -1.89
NUP88-213ENST00000576862 RPL13AP3Q6NVV1 102 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms