RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 MAGOHP61326 146 aaKnown RBP4.26□□□□□ -1.73
VPS53-219ENST00000576019 RPS23P62266 143 aaKnown RBP4.26□□□□□ -1.73
VPS53-219ENST00000576019 PRR3P79522 188 aaKnown RBP4.26□□□□□ -1.73
VPS53-219ENST00000576019 C2orf54Q08AI8 447 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 PON3Q15166 354 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 QPRTQ15274 297 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 OR1Q1Q15612 314 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 LRRC10Q5BKY1 277 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 CLVS2Q5SYC1 327 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 MED27Q6P2C8 311 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 WDR59Q6PJI9 974 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 TEX43Q6ZNM6 134 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 OR8K1Q8NGG5 319 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 OR10Z1Q8NGY1 313 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 OR2G3Q8NGZ4 309 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 VCX3BQ9H321 246 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 ASB8Q9H765 288 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 ZDHHC11Q9H8X9 412 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 GNB4Q9HAV0 340 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 EDA2RQ9HAV5 297 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 SCRT2Q9NQ03 307 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 STOML2Q9UJZ1 356 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 USH1CQ9Y6N9 552 aa4.26□□□□□ -1.73
VPS53-219ENST00000576019 SMIM23A6NLE4 172 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 GJE1A6NN92 205 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 TNFRSF11BO00300 401 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 KPNA3O00505 521 aaPredicted RBP4.25□□□□□ -1.73
VPS53-219ENST00000576019 FABP7O15540 132 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 KLF7O75840 302 aaPredicted RBP4.25□□□□□ -1.73
VPS53-219ENST00000576019 TNFSF13O75888 250 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 CHTF8P0CG12 524 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 ICAM2P13598 275 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 ZP3P21754 424 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 GRPRP30550 384 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 CEACAM6P40199 344 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 TGM4P49221 684 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 PSMD7P51665 324 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 STC1P52823 247 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 RAB8AP61006 207 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 PRPSAP1Q14558 356 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 SGCAQ16586 387 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 PRSS8Q16651 343 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 TIMM50Q3ZCQ8 353 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 CYB5R2Q6BCY4 276 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 SLC13A5Q86YT5 568 aaPredicted RBP4.25□□□□□ -1.73
VPS53-219ENST00000576019 SPICQ8N5J4 248 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 DCAF4L2Q8NA75 395 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 OR4K17Q8NGC6 315 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 OR5L1Q8NGL2 311 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 FAM57AQ8TBR7 257 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 BTN2A3PQ96KV6 586 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 SMIM14Q96QK8 99 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 GPR22Q99680 433 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
VPS53-219ENST00000576019 SLC19A3Q9BZV2 496 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 OR51V1Q9H2C8 321 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 MOKQ9UQ07 419 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 SIGLEC9Q9Y336 463 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 LRRC42Q9Y546 428 aa4.25□□□□□ -1.73
VPS53-219ENST00000576019 PLECQ15149 4684 aaKnown RBP4.25□□□□□ -1.73
VPS53-219ENST00000576019 IGKV2D-30A0A075B6S6 120 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 TRAV8-4A0A0B4J246 113 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 F5H5T6 163 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 GOLGA6L19H0YKK7 550 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 H3BNH8 94 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 HAT1O14929 419 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 HPGDSO60760 199 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 P01737 135 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 GIPP09681 153 aaPredicted RBP4.24□□□□□ -1.73
VPS53-219ENST00000576019 SLC35G6P0C7Q6 338 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 IGHV3-43DP0DP04 118 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 ZNF35P13682 527 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 ADRB3P13945 408 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 ZNF30P17039 623 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 FUT3P21217 361 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 MYL9P24844 172 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 RPA3P35244 121 aaPredicted RBP4.24□□□□□ -1.73
VPS53-219ENST00000576019 MDH2P40926 338 aaKnown RBP4.24□□□□□ -1.73
VPS53-219ENST00000576019 ZNF138P52744 262 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 CEBPGP53567 150 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 GFERP55789 205 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 AP3S2P59780 193 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 VBP1P61758 197 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 RFX4Q33E94 735 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 CEACAM21Q3KPI0 293 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 FBXL19-AS1Q494R0 122 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 FAM45BPQ6NSW5 357 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 ZNF613Q6PF04 617 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 CASP12Q6UXS9 341 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 C10orf107Q8IVU9 208 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 GAPTQ8N292 157 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 Q8N402 240 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 C11orf72Q8NBR9 251 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 OR13G1Q8NGZ3 307 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 NT5CQ8TCD5 201 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 RGP1Q92546 391 aaPredicted RBP4.24□□□□□ -1.73
VPS53-219ENST00000576019 LRRC58Q96CX6 371 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 FAM19A4Q96LR4 140 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 WACQ9BTA9 647 aa4.24□□□□□ -1.73
VPS53-219ENST00000576019 C9orf16Q9BUW7 83 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms