RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 RAB9BQ9NP90 201 aa6.98□□□□□ -1.29
SMG6-218ENST00000575454 MRPS28Q9Y2Q9 187 aaKnown RBP6.98□□□□□ -1.29
SMG6-218ENST00000575454 TRAV24A0A0B4J272 114 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 FAM90A10PA6NDY2 464 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 HSPB6O14558 160 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 IGLV1-40P01703 118 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 IGHV4-30-4P0DP06 118 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 PPIFP30405 207 aaKnown RBP6.97□□□□□ -1.29
SMG6-218ENST00000575454 SSTR5P35346 364 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 GNB1P62873 340 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 TMED1Q13445 227 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 KIAA0141Q14154 515 aaPredicted RBP6.97□□□□□ -1.29
SMG6-218ENST00000575454 IL13RA2Q14627 380 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 ASPHD1Q5U4P2 390 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 RSBN1Q5VWQ0 802 aaPredicted RBP6.97□□□□□ -1.29
SMG6-218ENST00000575454 ACSM6Q6P461 480 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 SSX6Q7RTT6 188 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 HS3ST5Q8IZT8 346 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 TMEM104Q8NE00 496 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 OR5D14Q8NGL3 314 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 OR13C9Q8NGT0 318 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 OR2G2Q8NGZ5 317 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 DLX4Q92988 240 aaPredicted RBP6.97□□□□□ -1.29
SMG6-218ENST00000575454 RNF166Q96A37 237 aaPredicted RBP6.97□□□□□ -1.29
SMG6-218ENST00000575454 OR5B12Q96R08 314 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 NR1H4Q96RI1 486 aaPredicted RBP6.97□□□□□ -1.29
SMG6-218ENST00000575454 ELOVL1Q9BW60 279 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 KLK15Q9H2R5 256 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 ZCCHC4Q9H5U6 513 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 MED4Q9NPJ6 270 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 C19orf73Q9NVV2 129 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 ENOPH1Q9UHY7 261 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 GNG8Q9UK08 70 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 MYRFQ9Y2G1 1151 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 ARL2BPQ9Y2Y0 163 aa6.97□□□□□ -1.29
SMG6-218ENST00000575454 TRAV41A0A0B4J266 112 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 A0A1W2PPE3 182 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 TMEM30CPA0ZSE6 113 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 MAGEA13PA6NCF6 341 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 SDCBPO00560 298 aaPredicted RBP6.96□□□□□ -1.3
SMG6-218ENST00000575454 HSPA12AO43301 675 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 ORC5O43913 435 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 MYF6P23409 242 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 CCR9P51686 369 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 F2RL1P55085 397 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 PITPNAQ00169 270 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 MMDQ15546 238 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 KISS1Q15726 138 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 SRSF7Q16629 238 aaKnown RBP eCLIP6.96□□□□□ -1.3
SMG6-218ENST00000575454 TMEM30BQ3MIR4 351 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 STEAP3Q658P3 488 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 FAHD1Q6P587 224 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 TCTEX1D1Q8N7M0 179 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 PXT1Q8NFP0 134 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 OR13C3Q8NGS6 347 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 CANT1Q8WVQ1 401 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 RFKQ969G6 155 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 ARL11Q969Q4 196 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 UTP4Q969X6 686 aaKnown RBP6.96□□□□□ -1.3
SMG6-218ENST00000575454 FLYWCH2Q96CP2 140 aaKnown RBP6.96□□□□□ -1.3
SMG6-218ENST00000575454 SPACA5Q96QH8 159 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 IL4I1Q96RQ9 567 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 MYCBPQ99417 103 aaPredicted RBP6.96□□□□□ -1.3
SMG6-218ENST00000575454 DPCDQ9BVM2 203 aaPredicted RBP6.96□□□□□ -1.3
SMG6-218ENST00000575454 GFOD1Q9NXC2 390 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 STUB1Q9UNE7 303 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 WSB1Q9Y6I7 421 aa6.96□□□□□ -1.3
SMG6-218ENST00000575454 ZAR1LA6NP61 321 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 MAGEB3O15480 346 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 SULT1B1O43704 296 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 HLA-DRB1P01911 266 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 CSTBP04080 98 aaKnown RBP6.95□□□□□ -1.3
SMG6-218ENST00000575454 ZNF137PP52743 207 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 ZNF691Q5VV52 312 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 C12orf73Q69YU5 71 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 FDX2Q6P4F2 183 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 SLC25A48Q6ZT89 311 aaKnown RBP6.95□□□□□ -1.3
SMG6-218ENST00000575454 ANKRD13BQ86YJ7 626 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 SERPINA12Q8IW75 414 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 MINDY2Q8NBR6 621 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 ARPC1AQ92747 370 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 CCDC124Q96CT7 223 aaKnown RBP6.95□□□□□ -1.3
SMG6-218ENST00000575454 NSL1Q96IY1 281 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 TOLLIPQ9H0E2 274 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 CST11Q9H112 138 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 IFT22Q9H7X7 185 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 FRRS1LQ9P0K9 344 aa6.95□□□□□ -1.3
SMG6-218ENST00000575454 ZNF736B4DX44 427 aaPredicted RBP6.94□□□□□ -1.3
SMG6-218ENST00000575454 G3V318 75 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 H0Y980 276 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 C15orf65H3BRN8 121 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 SLC16A6O15403 523 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 SPINT2O43291 252 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 SLC25A17O43808 307 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 HSPB1P04792 205 aaKnown RBP6.94□□□□□ -1.3
SMG6-218ENST00000575454 HTR1AP08908 422 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 LGALS1P09382 135 aaKnown RBP6.94□□□□□ -1.3
SMG6-218ENST00000575454 SLC2A2P11168 524 aaPredicted RBP6.94□□□□□ -1.3
SMG6-218ENST00000575454 ARSBP15848 533 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 CD40LGP29965 261 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms