RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 PIK3IP1Q96FE7 263 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 BTF3L4Q96K17 158 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 ARHGDIGQ99819 225 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 TAPBPLQ9BX59 468 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 ABCG5Q9H222 651 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 SPHK2Q9NRA0 654 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 RBM22Q9NW64 420 aaKnown RBP eCLIP2.62□□□□□ -1.99
NUP88-209ENST00000574855 THYN1Q9P016 225 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 OR12D3Q9UGF7 316 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 ANXA10Q9UJ72 324 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 ZNF257Q9Y2Q1 563 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 SIGLEC9Q9Y336 463 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 FBXO7Q9Y3I1 522 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 HSPB11Q9Y547 144 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 CSAG2Q9Y5P2 127 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 ZNF318Q5VUA4 2279 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 RGPD3A6NKT7 1758 aaPredicted RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 RGPD4Q7Z3J3 1758 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 YLPM1P49750 1951 aaKnown RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 BRWD3Q6RI45 1802 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 IGHV1OR21-1A0A087WYE8 117 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 IGKV6-21A0A0C4DH24 114 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 IGSF23A1L1A6 192 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 RBMY1BA6NDE4 496 aaKnown RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 RBMY1EA6NEQ0 496 aaKnown RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 OR4C46A6NHA9 309 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 SIGLEC16A6NMB1 481 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 E9PLD3 99 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 EIF1BO60739 113 aaKnown RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 OR7C1O76099 320 aaPredicted RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 MT-CO2P00403 227 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 LALBAP00709 142 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 THY1P04216 161 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 SERPINA7P05543 415 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 CRYGDP07320 174 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 OR10J4P0C629 311 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 RBMY1DP0C7P1 496 aaKnown RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 RBMY1A1P0DJD3 496 aaKnown RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 MYL12AP19105 171 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 HIST1H1TP22492 207 aaPredicted RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 S100A7P31151 101 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 PFN2P35080 140 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 EIF1P41567 113 aaKnown RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 GPR6P46095 362 aaPredicted RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 RAB2AP61019 212 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 NAA20P61599 178 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 SLC7A9P82251 487 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 BAXQ07812 192 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 KLHL12Q53G59 568 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 OTPQ5XKR4 325 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 Q6ZN92 141 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 RDH10Q8IZV5 341 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 SAMD12Q8N8I0 201 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 ST6GALNAC3Q8NDV1 305 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 OR2M7Q8NG81 312 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 OR6N1Q8NGY5 312 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 GRPEL2Q8TAA5 225 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 NT5CQ8TCD5 201 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 CD200R1Q8TD46 325 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 ABHD3Q8WU67 409 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 C1orf54Q8WWF1 131 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 FGF14Q92915 247 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 LRRC58Q96CX6 371 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 CMSS1Q9BQ75 279 aaKnown RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 GINS3Q9BRX5 216 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 C2orf88Q9BSF0 95 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 SLC25A39Q9BZJ4 359 aaPredicted RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 NMNAT1Q9HAN9 279 aaPredicted RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 ENY2Q9NPA8 101 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 EXOSC3Q9NQT5 275 aaKnown RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 CISHQ9NSE2 258 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 KCNIP1Q9NZI2 227 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 ARMCX1Q9P291 453 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 OPTCQ9UBM4 332 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 SS18L2Q9UHA2 77 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 VAX2Q9UIW0 290 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 RAB22AQ9UL26 194 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 CARHSP1Q9Y2V2 147 aaKnown RBP2.61□□□□□ -1.99
NUP88-209ENST00000574855 ATRXP46100 2492 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 COL1A2P08123 1366 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 FER1L5A0AVI2 2057 aa2.61□□□□□ -1.99
NUP88-209ENST00000574855 ABCA7Q8IZY2 2146 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 LOXHD1Q8IVV2 1947 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 SCN9AQ15858 1988 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 CROCCQ5TZA2 2017 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 IGKV1D-13A0A0B4J2D9 117 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 IGHV3-20A0A0C4DH32 117 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 EXOC1LA0A1B0GW35 172 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 LINC01619G3V211 115 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 MANBAO00462 879 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 SOCS3O14543 225 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 ATG12O94817 140 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 AIFM1O95831 613 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 REG1AP05451 166 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 OR13C7P0DN81 318 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 IGKV1-13P0DP09 117 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 PSMB1P20618 241 aaKnown RBP2.6□□□□□ -1.99
NUP88-209ENST00000574855 MYCNOSP40205 109 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 AKR1C3P42330 323 aa2.6□□□□□ -1.99
NUP88-209ENST00000574855 OR1E2P47887 323 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms