RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SLC46A1Q96NT5 459 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 ARV1Q9H2C2 271 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 CALHM2Q9HA72 323 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 U3KQA8 63 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 PCSK5Q92824 1860 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 LOC102724200A0A096LPH7 203 aaPredicted RBP8.31□□□□□ -1.08
CCDC40-212ENST00000574799 VSTM2BA6NLU5 285 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 TLX3O43711 291 aaPredicted RBP8.31□□□□□ -1.08
CCDC40-212ENST00000574799 CA11O75493 328 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 IL33O95760 270 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 CD27P26842 260 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 HNRNPA3P51991 378 aaKnown RBP8.31□□□□□ -1.08
CCDC40-212ENST00000574799 FOXL2P58012 376 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 NXPH1P58417 271 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 TPPP2P59282 170 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 TAS2R30P59541 319 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 LEMD1Q68G75 181 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 OR5AS1Q8N127 324 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 ZNF519Q8TB69 540 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.31□□□□□ -1.08
CCDC40-212ENST00000574799 YPEL4Q96NS1 127 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 RPRMQ9NS64 109 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 PLA2G3Q9NZ20 509 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 IGKV1D-43A0A0B4J1Z2 117 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 HSPB6O14558 160 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 BMP5P22003 454 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 UCP3P55916 312 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 MALLQ13021 153 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 VAMP3Q15836 100 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 ABLIM2Q6H8Q1 611 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 OR8G2PQ6IF36 304 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 H1FOOQ8IZA3 346 aaPredicted RBP8.31□□□□□ -1.08
CCDC40-212ENST00000574799 OR51H1Q8NH63 302 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 KLHDC7BQ96G42 594 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 ATP5SQ99766 215 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 NUDT16L1Q9BRJ7 211 aaKnown RBP8.31□□□□□ -1.08
CCDC40-212ENST00000574799 DUSP15Q9H1R2 295 aaPredicted RBP8.31□□□□□ -1.08
CCDC40-212ENST00000574799 RBKSQ9H477 322 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 GRIFINA4D1Z8 144 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 HRASP01112 189 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 IGHG1P01857 330 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 PPP1CBP62140 327 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 SUMO1P63165 101 aaKnown RBP8.3□□□□□ -1.08
CCDC40-212ENST00000574799 Q6ZN92 141 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 RHBDD1Q8TEB9 315 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 HSPB9Q9BQS6 159 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 MOB1AQ9H8S9 216 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 POLR3KQ9Y2Y1 108 aaPredicted RBP8.3□□□□□ -1.08
CCDC40-212ENST00000574799 CACNA1EQ15878 2313 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 ZNF816-ZNF321PA0A0X1KG74 233 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 LRRC3CA6NJW4 275 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 CEACAM18A8MTB9 384 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 CD38P28907 300 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 PMP22Q01453 160 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 FUT7Q11130 342 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 NSDHLQ15738 373 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 DEFB133Q30KQ1 61 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 OR8G5Q8NG78 346 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 TMEM171Q8WVE6 324 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 NAT6Q93015 286 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 ANGPTL4Q9BY76 406 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 PLEK2Q9NYT0 353 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 MED12Q93074 2177 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 IGKV3D-11A0A0A0MRZ8 115 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 LNP1A1A4G5 178 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 CD300LBA8K4G0 201 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 GUSBP08236 651 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 HOXA6P31267 233 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 SPANXN5Q5MJ07 72 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 MRGPRGQ86SM5 289 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 ZNF552Q9H707 407 aaPredicted RBP8.3□□□□□ -1.08
CCDC40-212ENST00000574799 SLC25A22Q9H936 323 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 PRDM6Q9NQX0 595 aa8.3□□□□□ -1.08
CCDC40-212ENST00000574799 LILRA5A6NI73 299 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 SHISA8B8ZZ34 492 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 CDS2O95674 445 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 GNB2P62879 340 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 WDR5BQ86VZ2 330 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 CADM4Q8NFZ8 388 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 CLDN23Q96B33 292 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 CHRNA10Q9GZZ6 450 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 KLRF1Q9NZS2 232 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 DCHS1Q96JQ0 3298 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 PI4KAP42356 2102 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 SMG1Q96Q15 3661 aaKnown RBP8.29□□□□□ -1.08
CCDC40-212ENST00000574799 A0A1B0GUS0 222 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 TOX3O15405 576 aaPredicted RBP8.29□□□□□ -1.08
CCDC40-212ENST00000574799 MPPED1O15442 326 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 RND2P52198 227 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 HBG1P69891 147 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 HBG2P69892 147 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 IL24Q13007 206 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 FAM90A2PQ658T7 463 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 SIGLECL1Q8N7X8 197 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 TMEM170AQ8WVE7 144 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 GUCD1Q96NT3 240 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 MIEN1Q9BRT3 115 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 CISD1Q9NZ45 108 aaKnown RBP8.29□□□□□ -1.08
CCDC40-212ENST00000574799 SHANK1Q9Y566 2161 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 EML6Q6ZMW3 1958 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms