RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 DTD1Q8TEA8 209 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 SDSLQ96GA7 329 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 TBX15Q96SF7 602 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 PLK3Q9H4B4 646 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 A0A0G2JRQ6 117 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 M0R135 149 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 TOX3O15405 576 aaPredicted RBP12.39□□□□□ -0.43
SMG6-215ENST00000574501 HRASP01112 189 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 SELEP16581 610 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 MRPS11P82912 194 aaKnown RBP12.39□□□□□ -0.43
SMG6-215ENST00000574501 TDRG1Q3Y452 100 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 CST9LP1Q5W188 147 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 CYP2G1PQ6ZSU1 146 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 MBD3L1Q8WWY6 194 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 ZNF799Q96GE5 643 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 RALGAPA1Q6GYQ0 2036 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 MAP1LC3B2A6NCE7 125 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 VDAC1P21796 283 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 GUCA1AP43080 201 aaPredicted RBP12.39□□□□□ -0.43
SMG6-215ENST00000574501 CNN1P51911 297 aaKnown RBP12.39□□□□□ -0.43
SMG6-215ENST00000574501 ZNF295-AS1Q8N0V1 137 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 OSR2Q8N2R0 312 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 PRR18Q8N4B5 295 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 GJC3Q8NFK1 279 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 POC1BQ8TC44 478 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 MAP1LC3BQ9GZQ8 125 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 OR51I2Q9H344 312 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 OR6C3Q9NZP0 311 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 KLRF1Q9NZS2 232 aa12.39□□□□□ -0.43
SMG6-215ENST00000574501 IGKV1D-13A0A0B4J2D9 117 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 TP53I11O14683 189 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 CNOT4O95628 575 aaKnown RBP12.38□□□□□ -0.43
SMG6-215ENST00000574501 IGKV1-13P0DP09 117 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 CTSSP25774 331 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 MDH2P40926 338 aaKnown RBP12.38□□□□□ -0.43
SMG6-215ENST00000574501 NPBWR2P48146 333 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 ZNF41P51814 821 aaPredicted RBP12.38□□□□□ -0.43
SMG6-215ENST00000574501 ARL16Q0P5N6 197 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 GAGE1Q13065 139 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 KCNMB1Q16558 191 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 PHYHD1Q5SRE7 291 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 OR2T10Q8NGZ9 312 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 LPAR2Q9HBW0 351 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 PLEK2Q9NYT0 353 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 WNT16Q9UBV4 365 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 A0A1W2PR80 420 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 KBTBD11O94819 623 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 IAPPP10997 89 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 OR10J1P30954 320 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 MALLQ13021 153 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 ACOT6Q3I5F7 207 aaPredicted RBP12.38□□□□□ -0.43
SMG6-215ENST00000574501 IL22RA2Q969J5 263 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 BORCS8Q96FH0 119 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 MS4A10Q96PG2 267 aa12.38□□□□□ -0.43
SMG6-215ENST00000574501 SPTY2D1-AS1A0A0U1RR47 76 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 H3BMH7 237 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 M0QZK8 103 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 GGCTO75223 188 aaKnown RBP12.37□□□□□ -0.43
SMG6-215ENST00000574501 OR7C1O76099 320 aaPredicted RBP12.37□□□□□ -0.43
SMG6-215ENST00000574501 MSR1P21757 451 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 MEF2BQ02080 365 aaPredicted RBP12.37□□□□□ -0.43
SMG6-215ENST00000574501 ENDOGQ14249 297 aaKnown RBP12.37□□□□□ -0.43
SMG6-215ENST00000574501 HIST3H3Q16695 136 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 C7orf61Q8IZ16 206 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 GATAD1Q8WUU5 269 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 LHX4Q969G2 390 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 ZNF845Q96IR2 970 aaPredicted RBP12.37□□□□□ -0.43
SMG6-215ENST00000574501 ABHD14BQ96IU4 210 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 PARLQ9H300 379 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 CCL28Q9NRJ3 127 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 PTRH2Q9Y3E5 179 aaKnown RBP12.37□□□□□ -0.43
SMG6-215ENST00000574501 CLEC18AA5D8T8 446 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 SCTP09683 121 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 LINC00614P0C842 121 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 BRS3P32247 399 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 TFPI2P48307 235 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 HNRNPKP61978 463 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMG6-215ENST00000574501 ZNF92Q03936 586 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 TRA2AQ13595 282 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMG6-215ENST00000574501 ANKRD39Q53RE8 183 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 CLEC18CQ8NCF0 446 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 LRRC61Q9BV99 259 aa12.37□□□□□ -0.43
SMG6-215ENST00000574501 RBM24Q9BX46 236 aaKnown RBP12.37□□□□□ -0.43
SMG6-215ENST00000574501 LILRA1O75019 489 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 PDCD6O75340 191 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 IFNA1P01562 189 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 LCATP04180 440 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 POU2F2P09086 479 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 TCN2P20062 427 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 FBLP22087 321 aaKnown RBP12.36□□□□□ -0.43
SMG6-215ENST00000574501 CHRNA7P36544 502 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 GNG10P50151 68 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 PLPPR5Q32ZL2 321 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 WDR5BQ86VZ2 330 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 SPSB1Q96BD6 273 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 OXGR1Q96P68 337 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 PARD6AQ9NPB6 346 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 GCH1P30793 250 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 OR5I1Q13606 314 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms