RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 LILRB4Q8NHJ6 448 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 DIRC2Q96SL1 478 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 HEXA-AS1Q9H8Q6 139 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 PLCE1Q9P212 2302 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 ERRFI1Q9UJM3 462 aaPredicted RBP23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 TRAPPC2LQ9UL33 140 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 SLC25A4P12235 298 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 TNFSF4P23510 183 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 GNRHRP30968 328 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 MOGAT3Q86VF5 341 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 LDLRAD3Q86YD5 345 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 LILRB1Q8NHL6 650 aaPredicted RBP23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 SEC22AQ96IW7 307 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 VRK1Q99986 396 aaPredicted RBP23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 SUCNR1Q9BXA5 334 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 ESRP2Q9H6T0 727 aaKnown RBP23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 COQ3Q9NZJ6 369 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 CXCL2P19875 107 aa23.86■■□□□ 1.41
CTDNEP1-210ENST00000574322 C4BPBP20851 252 aa23.86■■□□□ 1.41
CTDNEP1-210ENST00000574322 OR3A1P47881 315 aa23.86■■□□□ 1.41
CTDNEP1-210ENST00000574322 CD177Q8N6Q3 437 aa23.86■■□□□ 1.41
CTDNEP1-210ENST00000574322 LRTM2Q8N967 370 aa23.86■■□□□ 1.41
CTDNEP1-210ENST00000574322 OR10J5Q8NHC4 309 aa23.86■■□□□ 1.41
CTDNEP1-210ENST00000574322 Q8TCH9 128 aa23.86■■□□□ 1.41
CTDNEP1-210ENST00000574322 COMMD9Q9P000 198 aa23.86■■□□□ 1.41
CTDNEP1-210ENST00000574322 CD55P08174 381 aa23.85■■□□□ 1.41
CTDNEP1-210ENST00000574322 OR4A8P0C604 315 aa23.85■■□□□ 1.41
CTDNEP1-210ENST00000574322 PSG2P11465 335 aa23.85■■□□□ 1.41
CTDNEP1-210ENST00000574322 PRDX2P32119 198 aa23.85■■□□□ 1.41
CTDNEP1-210ENST00000574322 TNFAIP6P98066 277 aaPredicted RBP23.85■■□□□ 1.41
CTDNEP1-210ENST00000574322 HOXA4Q00056 320 aaPredicted RBP23.85■■□□□ 1.41
CTDNEP1-210ENST00000574322 COL10A1Q03692 680 aa23.85■■□□□ 1.41
CTDNEP1-210ENST00000574322 TMEM187Q14656 261 aa23.85■■□□□ 1.41
CTDNEP1-210ENST00000574322 PPP1R1CQ8WVI7 109 aa23.85■■□□□ 1.41
CTDNEP1-210ENST00000574322 OR2W1Q9Y3N9 320 aa23.85■■□□□ 1.41
CTDNEP1-210ENST00000574322 HIVEP3Q5T1R4 2406 aa23.85■■□□□ 1.41
CTDNEP1-210ENST00000574322 C5orf51A6NDU8 294 aa23.84■■□□□ 1.41
CTDNEP1-210ENST00000574322 VSTM5A8MXK1 200 aa23.84■■□□□ 1.41
CTDNEP1-210ENST00000574322 FAM25EA8MYX2 175 aa23.84■■□□□ 1.41
CTDNEP1-210ENST00000574322 KIRREL1Q96J84 757 aa23.84■■□□□ 1.41
CTDNEP1-210ENST00000574322 SHARPINQ9H0F6 387 aa23.84■■□□□ 1.41
CTDNEP1-210ENST00000574322 PRR13Q9NZ81 148 aa23.84■■□□□ 1.41
CTDNEP1-210ENST00000574322 ADAP1O75689 374 aa23.84■■□□□ 1.41
CTDNEP1-210ENST00000574322 RPA2P15927 270 aa23.84■■□□□ 1.41
CTDNEP1-210ENST00000574322 FAM222BQ8WU58 562 aa23.84■■□□□ 1.41
CTDNEP1-210ENST00000574322 COQ2Q96H96 371 aa23.84■■□□□ 1.41
CTDNEP1-210ENST00000574322 GCM1Q9NP62 436 aa23.84■■□□□ 1.41
CTDNEP1-210ENST00000574322 IGKV1D-17A0A075B6S4 117 aa23.83■■□□□ 1.41
CTDNEP1-210ENST00000574322 FXYD6-FXYD2A0A087WZ82 144 aa23.83■■□□□ 1.41
CTDNEP1-210ENST00000574322 SHISA9B4DS77 424 aa23.83■■□□□ 1.41
CTDNEP1-210ENST00000574322 GPR31O00270 319 aa23.83■■□□□ 1.41
CTDNEP1-210ENST00000574322 ZNF737O75373 536 aa23.83■■□□□ 1.41
CTDNEP1-210ENST00000574322 PHLDA2Q53GA4 152 aa23.83■■□□□ 1.41
CTDNEP1-210ENST00000574322 C11orf87Q6NUJ2 197 aa23.83■■□□□ 1.41
CTDNEP1-210ENST00000574322 ZNF767PQ75MW2 155 aa23.83■■□□□ 1.41
CTDNEP1-210ENST00000574322 ZNF565Q8N9K5 539 aa23.83■■□□□ 1.41
CTDNEP1-210ENST00000574322 ITGB1BP2Q9UKP3 347 aa23.83■■□□□ 1.41
CTDNEP1-210ENST00000574322 MYO18BQ8IUG5 2567 aa23.83■■□□□ 1.4
CTDNEP1-210ENST00000574322 IGKV1D-13A0A0B4J2D9 117 aa23.82■■□□□ 1.4
CTDNEP1-210ENST00000574322 L7N2F9 121 aa23.82■■□□□ 1.4
CTDNEP1-210ENST00000574322 MPPED1O15442 326 aa23.82■■□□□ 1.4
CTDNEP1-210ENST00000574322 ZG16O60844 167 aa23.82■■□□□ 1.4
CTDNEP1-210ENST00000574322 IGKV1-13P0DP09 117 aa23.82■■□□□ 1.4
CTDNEP1-210ENST00000574322 DMRTC2Q8IXT2 367 aaPredicted RBP23.82■■□□□ 1.4
CTDNEP1-210ENST00000574322 SLC5A7Q9GZV3 580 aa23.82■■□□□ 1.4
CTDNEP1-210ENST00000574322 TAF9BQ9HBM6 251 aa23.82■■□□□ 1.4
CTDNEP1-210ENST00000574322 RNF7Q9UBF6 113 aa23.82■■□□□ 1.4
CTDNEP1-210ENST00000574322 NDRG3Q9UGV2 375 aa23.82■■□□□ 1.4
CTDNEP1-210ENST00000574322 METRNQ9UJH8 293 aa23.82■■□□□ 1.4
CTDNEP1-210ENST00000574322 C13orf42A0A1B0GVH6 325 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 ARPC5O15511 151 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 HEXAP06865 529 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 SSTR2P30874 369 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 IL15RAQ13261 267 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 NDUFA5Q16718 116 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 OR11L1Q8NGX0 322 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 C2orf50Q96LR7 162 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 METTL8Q9H825 291 aaKnown RBP23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 KCNIP1Q9NZI2 227 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 OOEPA6NGQ2 149 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 OR5AC1P0C628 307 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 ADAM5Q6NVV9 412 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 LIAT1Q6ZQX7 453 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 GLYATL2Q8WU03 294 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 SECTM1Q8WVN6 248 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 LRRC46Q96FV0 321 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 DNAJB11Q9UBS4 358 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 KIF25Q9UIL4 384 aa23.81■■□□□ 1.4
CTDNEP1-210ENST00000574322 TRAV39A0A0B4J263 110 aa23.8■■□□□ 1.4
CTDNEP1-210ENST00000574322 FAM90A27PA6NNH2 459 aa23.8■■□□□ 1.4
CTDNEP1-210ENST00000574322 C17orf100A8MU93 164 aa23.8■■□□□ 1.4
CTDNEP1-210ENST00000574322 M0R233 179 aa23.8■■□□□ 1.4
CTDNEP1-210ENST00000574322 MPC2O95563 127 aa23.8■■□□□ 1.4
CTDNEP1-210ENST00000574322 PSMB6P28072 239 aa23.8■■□□□ 1.4
CTDNEP1-210ENST00000574322 AESQ08117 197 aa23.8■■□□□ 1.4
CTDNEP1-210ENST00000574322 OPCMLQ14982 345 aa23.8■■□□□ 1.4
CTDNEP1-210ENST00000574322 ZNF818PQ6ZRF7 136 aa23.8■■□□□ 1.4
CTDNEP1-210ENST00000574322 MSI2Q96DH6 328 aaKnown RBP23.8■■□□□ 1.4
CTDNEP1-210ENST00000574322 SNX22Q96L94 193 aa23.8■■□□□ 1.4
CTDNEP1-210ENST00000574322 TOLLIPQ9H0E2 274 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms