RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 IFT22Q9H7X7 185 aa16.76■□□□□ 0.27
CHRNB1-206ENST00000574054 PAK1IP1Q9NWT1 392 aaPredicted RBP16.76■□□□□ 0.27
CHRNB1-206ENST00000574054 BABAM2Q9NXR7 383 aa16.76■□□□□ 0.27
CHRNB1-206ENST00000574054 EXOSC1Q9Y3B2 195 aaKnown RBP16.76■□□□□ 0.27
CHRNB1-206ENST00000574054 CCRL2O00421 344 aa16.75■□□□□ 0.27
CHRNB1-206ENST00000574054 HSD17B6O14756 317 aa16.75■□□□□ 0.27
CHRNB1-206ENST00000574054 REG1BP48304 166 aa16.75■□□□□ 0.27
CHRNB1-206ENST00000574054 MOB3BQ86TA1 216 aa16.75■□□□□ 0.27
CHRNB1-206ENST00000574054 LINC00596Q86U02 117 aa16.75■□□□□ 0.27
CHRNB1-206ENST00000574054 ARL11Q969Q4 196 aa16.75■□□□□ 0.27
CHRNB1-206ENST00000574054 ZNF184Q99676 751 aaPredicted RBP16.75■□□□□ 0.27
CHRNB1-206ENST00000574054 CLEC2DQ9UHP7 191 aa16.75■□□□□ 0.27
CHRNB1-206ENST00000574054 DIMT1Q9UNQ2 313 aaKnown RBP16.75■□□□□ 0.27
CHRNB1-206ENST00000574054 SERPINE3A8MV23 424 aa16.74■□□□□ 0.27
CHRNB1-206ENST00000574054 OGG1O15527 345 aa16.74■□□□□ 0.27
CHRNB1-206ENST00000574054 GZMHP20718 246 aa16.74■□□□□ 0.27
CHRNB1-206ENST00000574054 ZFP41Q8N8Y5 198 aa16.74■□□□□ 0.27
CHRNB1-206ENST00000574054 GHSRQ92847 366 aa16.74■□□□□ 0.27
CHRNB1-206ENST00000574054 CHCHD3Q9NX63 227 aaKnown RBP16.74■□□□□ 0.27
CHRNB1-206ENST00000574054 CKLFQ9UBR5 152 aa16.74■□□□□ 0.27
CHRNB1-206ENST00000574054 LINC00527Q9UJ94 153 aa16.74■□□□□ 0.27
CHRNB1-206ENST00000574054 IGHV3-72A0A0B4J1Y9 119 aa16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 A0A1W2PP11 408 aa16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 EBAG9O00559 213 aa16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 SDCBPO00560 298 aaPredicted RBP16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 FGF16O43320 207 aa16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 ZNF780AO75290 641 aaPredicted RBP16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 LALBAP00709 142 aa16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 GTF2F2P13984 249 aa16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 MED21Q13503 144 aa16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 LRRC36Q1X8D7 754 aa16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 MPV17LQ2QL34 196 aa16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 STX19Q8N4C7 294 aa16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 CHPT1Q8WUD6 406 aa16.73■□□□□ 0.27
CHRNB1-206ENST00000574054 IGHV3-43A0A0B4J1X8 118 aa16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 IGHV1-3A0A0C4DH29 117 aa16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 TRBV5-5A0A0J9YX44 114 aa16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 MAGEA13PA6NCF6 341 aa16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 NUDT19A8MXV4 375 aa16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 AIPO00170 330 aa16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 GAPDHP04406 335 aaKnown RBP16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 IGHV3-43DP0DP04 118 aa16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 IGFBP3P17936 291 aaPredicted RBP16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 RPL23AP62750 156 aaKnown RBP16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 DMKNQ6E0U4 476 aaPredicted RBP16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 SLC35E3Q7Z769 313 aa16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 JAGN1Q8N5M9 183 aa16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 OR51D1Q8NGF3 324 aa16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 TMEM80Q96HE8 168 aa16.72■□□□□ 0.27
CHRNB1-206ENST00000574054 TRAV8-7A0A075B6U6 113 aa16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 PNMA8CA0A1B0GUJ8 204 aa16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 NCBP2LA6PVI3 153 aaKnown RBP16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 C15orf65H3BRN8 121 aa16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 DUS4LO95620 317 aaKnown RBP16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 SLC35B1P78383 322 aa16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 ZNF816Q0VGE8 651 aaPredicted RBP16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 Q499Y3 187 aa16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 FAM53AQ6NSI3 398 aaPredicted RBP16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 ZNF497Q6ZNH5 498 aa16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 LINC00482Q8N8I6 264 aa16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 OR52M1Q8NGK5 317 aa16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 MUL1Q969V5 352 aa16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 GFOD1Q9NXC2 390 aa16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 MRPS28Q9Y2Q9 187 aaKnown RBP16.71■□□□□ 0.27
CHRNB1-206ENST00000574054 A0A1W2PPK0 400 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 K7EIL1 84 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 MT-ND4P03905 459 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 IL3RAP26951 378 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 GPR176Q14439 515 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 YIF1BQ5BJH7 314 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 TTC23Q5W5X9 447 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 ETV3LQ6ZN32 361 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 C18orf65Q6ZTR6 163 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 OR2W3Q7Z3T1 314 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 FOXRED2Q8IWF2 684 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 MRPL41Q8IXM3 137 aaKnown RBP16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 SETD9Q8NE22 299 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 EAF1Q96JC9 268 aaPredicted RBP16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 OR14A2Q96R54 314 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 SPACA1Q9HBV2 294 aa16.7■□□□□ 0.26
CHRNB1-206ENST00000574054 COL7A1Q02388 2944 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 MCRIP1C9JLW8 97 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 ORC5O43913 435 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 GPX5O75715 221 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 HOXD3P31249 432 aaPredicted RBP16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 KRTAP10-11P60412 298 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 RPS11P62280 158 aaKnown RBP eCLIP16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 GLIPR1L1Q6UWM5 242 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 C8orf86Q6ZUL3 223 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 LINC00311Q8N616 119 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 KLHL30-AS1Q8NEE0 82 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 OR2T10Q8NGZ9 312 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 DPF1Q92782 380 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 TRAPPC2LQ9UL33 140 aa16.69■□□□□ 0.26
CHRNB1-206ENST00000574054 SPINT2O43291 252 aa16.68■□□□□ 0.26
CHRNB1-206ENST00000574054 IGHG2P01859 326 aa16.68■□□□□ 0.26
CHRNB1-206ENST00000574054 FSTP19883 344 aa16.68■□□□□ 0.26
CHRNB1-206ENST00000574054 ST3GAL4Q11206 333 aa16.68■□□□□ 0.26
CHRNB1-206ENST00000574054 EBI3Q14213 229 aa16.68■□□□□ 0.26
CHRNB1-206ENST00000574054 DEFB121Q5J5C9 76 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms