RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 OMGP23515 440 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 NFYBP25208 207 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 PRRX1P54821 245 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 C17orf58Q2M2W7 97 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 TUSC1Q2TAM9 212 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 TMEM30BQ3MIR4 351 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 IDNKQ5T6J7 187 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 PRAMEF5Q5TYX0 476 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 ZNF626Q68DY1 528 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 HCP5Q6MZN7 132 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 ZNF554Q86TJ5 538 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 NR2C2APQ86WQ0 139 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 ANKRD13BQ86YJ7 626 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 GAPTQ8N292 157 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 ABHD12Q8N2K0 398 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 PIP4P2Q8N4L2 257 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 OR4K15Q8NH41 348 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 ZNF596Q8TC21 504 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 ZFAND2BQ8WV99 257 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 ARL11Q969Q4 196 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 CREB3L1Q96BA8 519 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 PHF21AQ96BD5 680 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 RAB3CQ96E17 227 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 SULT4A1Q9BR01 284 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 FAAP24Q9BTP7 215 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 PRDM13Q9H4Q3 707 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 LINC00574Q9H8X3 128 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 CHMP1AQ9HD42 196 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 SCOCQ9UIL1 159 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 MGAT4AQ9UM21 535 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 ETV7Q9Y603 341 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 CUBNO60494 3623 aa10.41□□□□□ -0.74
TRAPPC1-206ENST00000573989 A0A0A6YYD4 124 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 POM121CA8CG34 1229 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 NPIPB11E5RHQ5 1161 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 SOCS1O15524 211 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 VENTXO95231 258 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 CLEC2LP0C7M8 214 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 SERPINB10P48595 397 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 MINOS1Q5TGZ0 78 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 Q6YL49 198 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 SLC16A12Q6ZSM3 486 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 MOB1BQ7L9L4 216 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 LDLRAD3Q86YD5 345 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 TMEM86BQ8N661 226 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 OR10R2Q8NGX6 335 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 SSMEM1Q8WWF3 244 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 KIRREL1Q96J84 757 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 ZNF48Q96MX3 618 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 ATG5Q9H1Y0 275 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 DPAGT1Q9H3H5 408 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 ABRACLQ9P1F3 81 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 POMT1Q9Y6A1 747 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 MINOS1-NBL1R4GNA1 71 aa10.4□□□□□ -0.74
TRAPPC1-206ENST00000573989 A0A087X0M5 115 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 A0A0B4J203 849 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 A0A1B0GX30 115 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 ODF3BA8MYP8 253 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 CLDN34H7C241 214 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 MMP23AO75900 390 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 TFAP2AP05549 437 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 CD34P28906 385 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 SSTR5P35346 364 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 CEACAM3P40198 252 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 RPL5P46777 297 aaKnown RBP10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 ALDH3B2P48448 385 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 ARHGDIBP52566 201 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 VBP1P61758 197 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 GPR107Q5VW38 600 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 BEND2Q8NDZ0 799 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 OR52M1Q8NGK5 317 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 OR9G1Q8NH87 305 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 RFESDQ8TAC1 157 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 NDNFQ8TB73 568 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 MRPL30Q8TCC3 161 aaKnown RBP10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 DYRK2Q92630 601 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 MALSU1Q96EH3 234 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 ARHGAP5-AS1Q96IT6 56 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 CMSS1Q9BQ75 279 aaKnown RBP10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 PECRQ9BY49 303 aa10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 AMMECR1Q9Y4X0 333 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC1-206ENST00000573989 TRAV39A0A0B4J263 110 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 MDFIC2A0A1B0GVS7 189 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 DNAJC9-AS1A6NH13 148 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 SERPINE3A8MV23 424 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 C15orf65H3BRN8 121 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 SDCBPO00560 298 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 HOXA3O43365 443 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 NOL3O60936 208 aaKnown RBP10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 GABARAPO95166 117 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 MELTFP08582 738 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 CD3GP09693 182 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 SNRPBP14678 240 aaKnown RBP10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 HTR1DP28221 377 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 RPS19P39019 145 aaKnown RBP10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 EFNB2P52799 333 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 TMEM50BP56557 158 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 NCS1P62166 190 aa10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 UBA52P62987 128 aaKnown RBP10.38□□□□□ -0.75
TRAPPC1-206ENST00000573989 AANATQ16613 207 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms