RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 VDAC2P45880 294 aaPredicted RBP13.87□□□□□ -0.19
SMG6-214ENST00000573827 LOXL3P58215 753 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 RBM39Q14498 530 aaKnown RBP13.87□□□□□ -0.19
SMG6-214ENST00000573827 INSL4Q14641 139 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 BEAN1Q3B7T3 259 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 ZNF497Q6ZNH5 498 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 SLC16A12Q6ZSM3 486 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 NDUFA11Q86Y39 141 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 THNSL2Q86YJ6 484 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 CDH26Q8IXH8 852 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 TMEM104Q8NE00 496 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 SGCDQ92629 289 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 CSTBP04080 98 aaKnown RBP13.86□□□□□ -0.19
SMG6-214ENST00000573827 GTF2F2P13984 249 aa13.86□□□□□ -0.19
SMG6-214ENST00000573827 SIGIRRQ6IA17 410 aa13.86□□□□□ -0.19
SMG6-214ENST00000573827 CCDC144NLQ6NUI1 221 aa13.86□□□□□ -0.19
SMG6-214ENST00000573827 GLIPR1L1Q6UWM5 242 aa13.86□□□□□ -0.19
SMG6-214ENST00000573827 UNQ9370/PRO34162Q6UXP9 181 aa13.86□□□□□ -0.19
SMG6-214ENST00000573827 CKLFQ9UBR5 152 aa13.86□□□□□ -0.19
SMG6-214ENST00000573827 MRPS28Q9Y2Q9 187 aaKnown RBP13.86□□□□□ -0.19
SMG6-214ENST00000573827 A0A1W2PPE3 182 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 CDK1P06493 297 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 CD37P11049 281 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 GZMHP20718 246 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 MADCAM1Q13477 382 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 IRF3Q14653 427 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 LTC4SQ16873 150 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 NSUN5P1Q3KNT7 163 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 ABCA11PQ4W5N1 156 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 C10orf99Q6UWK7 81 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 STX19Q8N4C7 294 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 JAGN1Q8N5M9 183 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 LINC00311Q8N616 119 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 DRAM1Q8N682 238 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 C8orf31Q8N9H6 132 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 OR52M1Q8NGK5 317 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 OR56B4Q8NH76 319 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 RPEQ96AT9 228 aa13.85□□□□□ -0.19
SMG6-214ENST00000573827 MRPS24Q96EL2 167 aaKnown RBP13.85□□□□□ -0.19
SMG6-214ENST00000573827 AMMECR1Q9Y4X0 333 aaPredicted RBP13.85□□□□□ -0.19
SMG6-214ENST00000573827 MYL12BO14950 172 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 ORC5O43913 435 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 SC5DO75845 299 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 MAS1P04201 325 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 LPLP06858 475 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 SNRNP70P08621 437 aaKnown RBP13.84□□□□□ -0.19
SMG6-214ENST00000573827 GNG10P50151 68 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 ARHGDIBP52566 201 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 GPR176Q14439 515 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 C6orf141Q5SZD1 244 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 ATAD3CQ5T2N8 411 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 FAM27D1Q5T7N8 215 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 OR5AU1Q8NGC0 362 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 UBALD1Q8TB05 177 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 TOMM40LQ969M1 308 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 ST6GALNAC6Q969X2 333 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 AKR1E2Q96JD6 320 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 Q96M66 194 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 DCLRE1BQ9H816 532 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 PCDHB16Q9NRJ7 776 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 GFOD1Q9NXC2 390 aa13.84□□□□□ -0.19
SMG6-214ENST00000573827 FAM90A10PA6NDY2 464 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 FAM90A7PA6NKC0 464 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 FAM90A23PA8MXZ1 464 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 C12orf77C9JDV5 145 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 VHLP40337 213 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 MNDAP41218 407 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 EMX1Q04741 257 aaPredicted RBP13.83□□□□□ -0.2
SMG6-214ENST00000573827 ZNF816Q0VGE8 651 aaPredicted RBP13.83□□□□□ -0.2
SMG6-214ENST00000573827 EBI3Q14213 229 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 LRRTM1Q86UE6 522 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 OR8H3Q8N146 312 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 Q8N6K4 173 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 ZNF439Q8NDP4 499 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 CCDC107Q8WV48 283 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 CAPSLQ8WWF8 208 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 ARL11Q969Q4 196 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 S100A13Q99584 98 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 UQCC2Q9BRT2 126 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 BANF2Q9H503 90 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 SPACA1Q9HBV2 294 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 ERGIC3Q9Y282 383 aa13.83□□□□□ -0.2
SMG6-214ENST00000573827 M0QZK8 103 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 SLC31A2O15432 143 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 FAM106CPP0CH98 169 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 MGMTP16455 207 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 RAB7AP51149 207 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 AQP4P55087 323 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 SLC35A2P78381 396 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 AWAT2Q6E213 333 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 RAB12Q6IQ22 244 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 NKAIN3Q8N8D7 197 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 C5orf56Q8N8D9 126 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 WFDC9Q8NEX5 89 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 MOB4Q9Y3A3 225 aa13.82□□□□□ -0.2
SMG6-214ENST00000573827 H3BUI4 141 aa13.81□□□□□ -0.2
SMG6-214ENST00000573827 AIPO00170 330 aa13.81□□□□□ -0.2
SMG6-214ENST00000573827 HSD17B6O14756 317 aa13.81□□□□□ -0.2
SMG6-214ENST00000573827 ZNF134P52741 427 aa13.81□□□□□ -0.2
SMG6-214ENST00000573827 Q3ZCU0 254 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms